Sample information

Sample ID SRR9687652
Sample Accession SRR9687652 Sequencing Platform OXFORD_NANOPORE Read Count 6363 Base Count 18831948
Bioproject ID PRJNA554461 Scientific Name human lung metagenome
Read Length N50 3487 Reads < 1 kb (%) 0.0642778563570643
Sampling Context endotracheal aspirate Host Health / Disease pneumonia
Study Title Metagenomic Identification of Severe Pneumonia Pathogens in Mechanically-Ventilated Patients

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Not Available

Genome bin quality distribution

Not Available

Phylogenomic tree of genome bins

Not Available


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling