Sample information Sequencing quality control
Assembly-free analysis Read-level taxonomic profiling Gene screening
Assembly-based analysis Assembly quality assessment Genome bin quality & Taxonomic assignment Genome bin quality distribution Phylogenomic tree of genome bins Predicted ORF metrics Gene-level taxonomic profiling

Sample information

Sample ID SRR9687632
Sample Accession SRR9687632 Sequencing Platform OXFORD_NANOPORE Read Count 1432 Base Count 2778590
Bioproject ID PRJNA554461 Scientific Name human lung metagenome
Read Length N50 2338 Reads < 1 kb (%) 0.187150837988827
Sampling Context endotracheal aspirate Host Health / Disease pneumonia
Study Title Metagenomic Identification of Severe Pneumonia Pathogens in Mechanically-Ventilated Patients

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening

Not Available
Not Available
Not Available


Assembly-based analysis

Assembly quality assessment

Not Available
Genome-centric

Genome bin quality & Taxonomic assignment

Not Available

Genome bin quality distribution

Not Available

Phylogenomic tree of genome bins

Not Available


Gene-centric

Predicted ORF metrics

Not Available

Gene-level taxonomic profiling

Not Available