Sample information Sequencing quality control
Assembly-free analysis Read-level taxonomic profiling Gene screening
Assembly-based analysis Assembly quality assessment Genome bin quality & Taxonomic assignment Genome bin quality distribution Phylogenomic tree of genome bins Predicted ORF metrics Gene-level taxonomic profiling

Sample information

Sample ID SRR8641384
Sample Accession SRR8641384 Sequencing Platform OXFORD_NANOPORE Read Count 2650717 Base Count 1619975061
Bioproject ID PRJNA524377 Scientific Name human sputum metagenome
Read Length N50 622 Reads < 1 kb (%) 0.902858735957101
Sampling Context sputum Host Health / Disease healthy
Study Title Clinical metagenomic approach for pathogen recovery from bronchoalveolar lavage using MinION

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening

Not Available
Not Available
Not Available


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Not Available

Genome bin quality distribution

Not Available

Phylogenomic tree of genome bins

Not Available


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Not Available