NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 611.1 |
| Mean read quality | 9.0 |
| Median read length | 458.0 |
| Median read quality | 9.7 |
| Number of reads | 2,650,717.0 |
| Read length N50 | 622.0 |
| STDEV read length | 579.5 |
| Total bases | 1,619,975,061.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 2650717 (100.0%) 1620.0Mb |
| >Q7 | 2649378 (99.9%) 1619.3Mb |
| >Q10 | 1003018 (37.8%) 673.4Mb |
| >Q12 | 17277 (0.7%) 10.6Mb |
| >Q15 | 0 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 13.9 (423) |
| 2 | 13.8 (367) |
| 3 | 13.8 (366) |
| 4 | 13.8 (386) |
| 5 | 13.7 (539) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 38004 (10.1) |
| 2 | 35257 (11.1) |
| 3 | 27448 (10.4) |
| 4 | 26432 (9.9) |
| 5 | 24410 (10.9) |