Sample information

Sample ID SRR30184333
Sample Accession SRR30184333 Sequencing Platform OXFORD_NANOPORE Read Count 268359 Base Count 565704275
Bioproject ID PRJNA1146314 Scientific Name skin metagenome
Read Length N50 3568 Reads < 1 kb (%) 0.413595221326656
Sampling Context skin Host Health / Disease wound infection
Study Title Clinical metagenomics analysis of wound swab samples

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling