Sample information

Sample ID SRR18531804_SRR18531805
Sample Accession SRR18531804 Sequencing Platform ILLUMINA Read Count 563706 Base Count 164613243
Sample Accession SRR18531805 Sequencing Platform OXFORD_NANOPORE Read Count 50378 Base Count 121670553
Bioproject ID PRJNA821338 Scientific Name metagenome
Read Length N50 1912 Reads < 1 kb (%) 0.0703481678510461
Sampling Context bronchoalveolar lavage fluid Host Health / Disease suspected lower respiratory infection
Study Title Bacterial pathogens and antimicrobial resistance diagnosis workflow using Nanopore adaptive sampling method

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Not Available

Genome bin quality distribution

Not Available

Phylogenomic tree of genome bins

Not Available


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Gene functional annotation profiles

Resistome annotation profiles