Sample information Sequencing quality control
Assembly-free analysis Read-level taxonomic profiling Gene screening
Assembly-based analysis Assembly quality assessment Genome bin quality & Taxonomic assignment Genome bin quality distribution Phylogenomic tree of genome bins Predicted ORF metrics Gene-level taxonomic profiling Gene functional annotation profiles Resistome annotation profiles

Sample information

Sample ID SRR18531791_SRR18531792
Sample Accession SRR18531791 Sequencing Platform ILLUMINA Read Count 146833 Base Count 41748765
Sample Accession SRR18531792 Sequencing Platform OXFORD_NANOPORE Read Count 32975 Base Count 65127033
Bioproject ID PRJNA821338 Scientific Name metagenome
Read Length N50 2233 Reads < 1 kb (%) 0.207247915087187
Sampling Context bronchoalveolar lavage fluid Host Health / Disease suspected lower respiratory infection
Study Title Bacterial pathogens and antimicrobial resistance diagnosis workflow using Nanopore adaptive sampling method

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Not Available

Genome bin quality distribution

Not Available

Phylogenomic tree of genome bins

Not Available


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Gene functional annotation profiles

Not Available

Resistome annotation profiles

Not Available
Not Available
Not Available
Not Available