Sample information

Sample ID SRR17200871
Sample Accession SRR17200871 Sequencing Platform OXFORD_NANOPORE Read Count 40035 Base Count 16818716
Bioproject ID PRJNA751627 Scientific Name Escherichia coli
Read Length N50 456 Reads < 1 kb (%) 0.958236543024853
Sampling Context urine Host Health / Disease suspected acute or chronic infection
Study Title metagenomic sequencing of UTI samples

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Not Available
Genome-centric

Genome bin quality & Taxonomic assignment

Not Available

Genome bin quality distribution

Not Available

Phylogenomic tree of genome bins

Not Available


Gene-centric

Predicted ORF metrics

Not Available

Gene-level taxonomic profiling

Not Available