Sample information

Sample ID SRR17200869
Sample Accession SRR17200869 Sequencing Platform OXFORD_NANOPORE Read Count 17903 Base Count 10595604
Bioproject ID PRJNA751627 Scientific Name Enterococcus faecium
Read Length N50 684 Reads < 1 kb (%) 0.88063453052561
Sampling Context urine Host Health / Disease suspected acute or chronic infection
Study Title metagenomic sequencing of UTI samples

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening

Not Available


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Not Available

Genome bin quality distribution

Not Available

Phylogenomic tree of genome bins

Not Available


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling