Sample information

Sample ID SRR16355160
Sample Accession SRR16355160 Sequencing Platform OXFORD_NANOPORE Read Count 51543 Base Count 41553003
Bioproject ID PRJNA751627 Scientific Name human metagenome
Read Length N50 1210 Reads < 1 kb (%) 0.715305667112896
Sampling Context urine Host Health / Disease suspected acute or chronic infection
Study Title metagenomic sequencing of UTI samples

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening

Not Available


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling