Sample information

Sample ID SRR15901992
Sample Accession SRR15901992 Sequencing Platform OXFORD_NANOPORE Read Count 204472 Base Count 258553989
Bioproject ID PRJNA763343 Scientific Name human metagenome
Read Length N50 1496 Reads < 1 kb (%) 0.335733009898666
Sampling Context bronchoalveolar lavage fluid Host Health / Disease pulmonary infection
Study Title nanopore adaptive sequencing for pediatric respiratory samples

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling