Sample information

Sample ID SRR15489030_SRR15489017
Sample Accession SRR15489030 Sequencing Platform ILLUMINA Read Count 29243331 Base Count 8229056451
Sample Accession SRR15489017 Sequencing Platform PACBIO_SMRT Read Count 1095633 Base Count 7352680729
Bioproject ID PRJNA754443 Scientific Name human gut metagenome
Read Length N50 7396 Reads < 1 kb (%) 9.67477248312163e-05
Sampling Context stool Host Health / Disease allergic disease-live biotherapeutic product treatment
Study Title Comparison of short-read and long-read amplicon and metagenomic sequencing data from clinical microbiome samples

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening

Not Available


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Not Available

Gene functional annotation profiles

Not Available
Not Available
Not Available
Not Available

Resistome annotation profiles

Not Available
Not Available
Not Available
Not Available