Sample information

Sample ID SRR15489029_SRR15489016
Sample Accession SRR15489029 Sequencing Platform ILLUMINA Read Count 40045963 Base Count 11381316830
Sample Accession SRR15489016 Sequencing Platform PACBIO_SMRT Read Count 717518 Base Count 3613848862
Bioproject ID PRJNA754443 Scientific Name human gut metagenome
Read Length N50 5482 Reads < 1 kb (%) 0.000628555659927695
Sampling Context stool Host Health / Disease allergic disease-placebo treatment
Study Title Comparison of short-read and long-read amplicon and metagenomic sequencing data from clinical microbiome samples

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Gene functional annotation profiles

Resistome annotation profiles