Sample information Sequencing quality control
Assembly-free analysis Read-level taxonomic profiling Gene screening
Assembly-based analysis Assembly quality assessment Genome bin quality & Taxonomic assignment Genome bin quality distribution Phylogenomic tree of genome bins Predicted ORF metrics Gene-level taxonomic profiling Gene functional annotation profiles Resistome annotation profiles

Sample information

Sample ID SRR12401417_SRR12401425
Sample Accession SRR12401417 Sequencing Platform ILLUMINA Read Count 7335100 Base Count 1098822444
Sample Accession SRR12401425 Sequencing Platform OXFORD_NANOPORE Read Count 38465 Base Count 101299672
Bioproject ID PRJNA655185 Scientific Name human gut metagenome
Read Length N50 3546 Reads < 1 kb (%) 0.159443650071494
Sampling Context rectal swab Host Health / Disease vancomycin-resistant Enterococci infection
Study Title Metagenomic Next-Generation Sequencing of Rectal Swabs for ARO Surveillance

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Not Available

Genome bin quality distribution

Not Available

Phylogenomic tree of genome bins

Not Available


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Gene functional annotation profiles

Resistome annotation profiles