Sample information

Sample ID ERR6750193_ERR6713748
Sample Accession ERR6750193 Sequencing Platform ILLUMINA Read Count 84802244 Base Count 12720336600
Sample Accession ERR6713748 Sequencing Platform OXFORD_NANOPORE Read Count 188301 Base Count 598900946
Bioproject ID PRJEB47445 Scientific Name metagenome
Read Length N50 4627 Reads < 1 kb (%) 0.117269690548643
Sampling Context stool Host Health / Disease obese
Study Title Exploring semi-quantitative metagenomics studies using Oxford Nanopore sequencing : a computational and experimental protocol

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Not Available

Gene-level taxonomic profiling

Not Available

Gene functional annotation profiles

Not Available
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Resistome annotation profiles

Not Available
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