Sample information

Sample ID ERR6713556
Sample Accession ERR6713556 Sequencing Platform OXFORD_NANOPORE Read Count 59752 Base Count 199913025
Bioproject ID PRJEB47445 Scientific Name metagenome
Read Length N50 4336 Reads < 1 kb (%) 0.0891350917124113
Sampling Context stool Host Health / Disease obese
Study Title Exploring semi-quantitative metagenomics studies using Oxford Nanopore sequencing : a computational and experimental protocol

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening

Not Available


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling