Sample information

Sample ID ERR5247002
Sample Accession ERR5247002 Sequencing Platform OXFORD_NANOPORE Read Count 841 Base Count 1341193
Bioproject ID PRJEB42910 Scientific Name metagenome
Read Length N50 3781 Reads < 1 kb (%) 0.593341260404281
Sampling Context knee sonication fluid Host Health / Disease prosthetic joint infection
Study Title Optimization of prosthetic joint infection sample DNA extraction for Nanopore sequencing

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening

Not Available


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Not Available

Genome bin quality distribution

Not Available

Phylogenomic tree of genome bins

Not Available


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling