Sample information

Sample ID ERR3201930_ERR3201954
Sample Accession ERR3201930 Sequencing Platform ILLUMINA Read Count 15591847 Base Count 3149539655
Sample Accession ERR3201954 Sequencing Platform OXFORD_NANOPORE Read Count 3165776 Base Count 5231931854
Bioproject ID PRJEB29152 Scientific Name gut metagenome
Read Length N50 2583 Reads < 1 kb (%) 0.530570703675813
Sampling Context stool Host Health / Disease colonization with carbapenem-resistant Enterobacteriaceae
Study Title CaPES

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Gene functional annotation profiles

Resistome annotation profiles