Sample information Sequencing quality control
Assembly-free analysis Read-level taxonomic profiling Gene screening
Assembly-based analysis Assembly quality assessment Genome bin quality & Taxonomic assignment Genome bin quality distribution Phylogenomic tree of genome bins Predicted ORF metrics Gene-level taxonomic profiling Gene functional annotation profiles Resistome annotation profiles

Sample information

Sample ID ERR3201923_ERR3201947
Sample Accession ERR3201923 Sequencing Platform ILLUMINA Read Count 60606825 Base Count 12121350717
Sample Accession ERR3201947 Sequencing Platform OXFORD_NANOPORE Read Count 2842735 Base Count 2571410746
Bioproject ID PRJEB29152 Scientific Name gut metagenome
Read Length N50 1208 Reads < 1 kb (%) 0.703882000960343
Sampling Context stool Host Health / Disease colonization with carbapenem-resistant Enterobacteriaceae
Study Title CaPES

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Not Available

Gene functional annotation profiles

Not Available
Not Available
Not Available
Not Available

Resistome annotation profiles

Not Available
Not Available
Not Available
Not Available