Sample information Sequencing quality control
Assembly-free analysis Read-level taxonomic profiling Gene screening
Assembly-based analysis Assembly quality assessment Genome bin quality & Taxonomic assignment Genome bin quality distribution Phylogenomic tree of genome bins Predicted ORF metrics Gene-level taxonomic profiling Gene functional annotation profiles Resistome annotation profiles

Sample information

Sample ID ERR3201919_ERR3201943
Sample Accession ERR3201919 Sequencing Platform ILLUMINA Read Count 27943396 Base Count 5588670138
Sample Accession ERR3201943 Sequencing Platform OXFORD_NANOPORE Read Count 1517915 Base Count 6092733687
Bioproject ID PRJEB29152 Scientific Name gut metagenome
Read Length N50 5053 Reads < 1 kb (%) 0.10596607846948
Sampling Context stool Host Health / Disease colonization with carbapenem-resistant Enterobacteriaceae
Study Title CaPES

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Not Available

Gene functional annotation profiles

Not Available
Not Available
Not Available
Not Available

Resistome annotation profiles

Not Available
Not Available
Not Available
Not Available