Sample information Sequencing quality control
Assembly-free analysis Read-level taxonomic profiling Gene screening
Assembly-based analysis Assembly quality assessment Genome bin quality & Taxonomic assignment Genome bin quality distribution Phylogenomic tree of genome bins Predicted ORF metrics Gene-level taxonomic profiling Gene functional annotation profiles Resistome annotation profiles

Sample information

Sample ID ERR3201918_ERR3201942
Sample Accession ERR3201918 Sequencing Platform ILLUMINA Read Count 14162400 Base Count 2832478845
Sample Accession ERR3201942 Sequencing Platform OXFORD_NANOPORE Read Count 2478874 Base Count 4256375087
Bioproject ID PRJEB29152 Scientific Name gut metagenome
Read Length N50 3764 Reads < 1 kb (%) 0.591364062876935
Sampling Context stool Host Health / Disease colonization with carbapenem-resistant Enterobacteriaceae
Study Title CaPES

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Not Available

Genome bin quality distribution

Not Available

Phylogenomic tree of genome bins

Not Available


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Not Available

Gene functional annotation profiles

Not Available
Not Available
Not Available
Not Available

Resistome annotation profiles

Not Available
Not Available
Not Available
Not Available