Sample information

Sample ID ERR3201916_ERR3201940
Sample Accession ERR3201916 Sequencing Platform ILLUMINA Read Count 11632533 Base Count 2330739713
Sample Accession ERR3201940 Sequencing Platform OXFORD_NANOPORE Read Count 845950 Base Count 1006225751
Bioproject ID PRJEB29152 Scientific Name gut metagenome
Read Length N50 2531 Reads < 1 kb (%) 0.682488326733258
Sampling Context stool Host Health / Disease colonization with carbapenem-resistant Enterobacteriaceae
Study Title CaPES

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Gene functional annotation profiles

Resistome annotation profiles