Sample information

Sample ID ERR14005107
Sample Accession ERR14005107 Sequencing Platform OXFORD_NANOPORE Read Count 436544 Base Count 1263348766
Bioproject ID PRJEB75510 Scientific Name metagenome
Read Length N50 5321 Reads < 1 kb (%) 0.342100681718223
Sampling Context rectal and nasopharyngeal swab Host Health / Disease unclassified
Study Title Evaluation of DNA extraction kits for long-read shotgun metagenomics using Oxford Nanopore sequencing for rapid taxonomic and antimicrobial resistance detection

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Not Available

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling