Sample information

Sample ID ERR14005106
Sample Accession ERR14005106 Sequencing Platform OXFORD_NANOPORE Read Count 374360 Base Count 1365902281
Bioproject ID PRJEB75510 Scientific Name metagenome
Read Length N50 6703 Reads < 1 kb (%) 0.285468532962923
Sampling Context rectal and nasopharyngeal swab Host Health / Disease unclassified
Study Title Evaluation of DNA extraction kits for long-read shotgun metagenomics using Oxford Nanopore sequencing for rapid taxonomic and antimicrobial resistance detection

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling