Sample information Sequencing quality control
Assembly-free analysis Read-level taxonomic profiling Gene screening
Assembly-based analysis Assembly quality assessment Genome bin quality & Taxonomic assignment Genome bin quality distribution Phylogenomic tree of genome bins Predicted ORF metrics Gene-level taxonomic profiling

Sample information

Sample ID ERR12018997
Sample Accession ERR12018997 Sequencing Platform OXFORD_NANOPORE Read Count 306 Base Count 615241
Bioproject ID PRJEB61294 Scientific Name metagenome
Read Length N50 2685 Reads < 1 kb (%) 0.261437908496732
Sampling Context bronchoalveolar lavage fluid Host Health / Disease lower respiratory tract infection;septic Shock
Study Title Viral, Bacterial and Fungal Metagenomic protocol

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening

Not Available
Not Available
Not Available


Assembly-based analysis

Assembly quality assessment

Not Available
Genome-centric

Genome bin quality & Taxonomic assignment

Not Available

Genome bin quality distribution

Not Available

Phylogenomic tree of genome bins

Not Available


Gene-centric

Predicted ORF metrics

Not Available

Gene-level taxonomic profiling

Not Available