Sample information Sequencing quality control
Assembly-free analysis Read-level taxonomic profiling Gene screening
Assembly-based analysis Assembly quality assessment Genome bin quality & Taxonomic assignment Genome bin quality distribution Phylogenomic tree of genome bins Predicted ORF metrics Gene-level taxonomic profiling

Sample information

Sample ID ERR11635564
Sample Accession ERR11635564 Sequencing Platform OXFORD_NANOPORE Read Count 66027 Base Count 135029095
Bioproject ID PRJEB61294 Scientific Name metagenome
Read Length N50 2113 Reads < 1 kb (%) 0.00829963499780393
Sampling Context pleural fluid Host Health / Disease empyema
Study Title Viral, Bacterial and Fungal Metagenomic protocol

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Not Available

Gene screening

Not Available
Not Available


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling