Sample information

Sample ID ERR11550584
Sample Accession ERR11550584 Sequencing Platform OXFORD_NANOPORE Read Count 204989 Base Count 381501090
Bioproject ID PRJEB62780 Scientific Name metagenome
Read Length N50 2016 Reads < 1 kb (%) 0.1052885764602
Sampling Context sputum Host Health / Disease asthma
Study Title Characterisation of airway microbiome in two severe asthma cohorts using Nanopore sequencing of induced sputum and nasal lavage

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Not Available

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling