Sample information

Sample ID ERR11550568
Sample Accession ERR11550568 Sequencing Platform OXFORD_NANOPORE Read Count 155284 Base Count 347391689
Bioproject ID PRJEB62780 Scientific Name metagenome
Read Length N50 2419 Reads < 1 kb (%) 0.073999896962984
Sampling Context sputum Host Health / Disease asthma
Study Title Characterisation of airway microbiome in two severe asthma cohorts using Nanopore sequencing of induced sputum and nasal lavage

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling