Sample information

Sample ID ERR11513016
Sample Accession ERR11513016 Sequencing Platform OXFORD_NANOPORE Read Count 82702 Base Count 294707924
Bioproject ID PRJEB62780 Scientific Name metagenome
Read Length N50 3824 Reads < 1 kb (%) 0.0134579574859133
Sampling Context nasal lavage Host Health / Disease asthma
Study Title Characterisation of airway microbiome in two severe asthma cohorts using Nanopore sequencing of induced sputum and nasal lavage

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling