Sample information

Sample ID ERR10960992
Sample Accession ERR10960992 Sequencing Platform OXFORD_NANOPORE Read Count 207 Base Count 626361
Bioproject ID PRJEB59568 Scientific Name lung metagenome
Read Length N50 3195 Reads < 1 kb (%) 0.0144927536231884
Sampling Context bronchoalveolar lavage fluid Host Health / Disease suspected lower respiratory infection
Study Title Feasibility and clinical impact of providing a daily respiratory metagenomic service for intensive care unit patients

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Not Available

Genome bin quality distribution

Not Available

Phylogenomic tree of genome bins

Not Available


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling