Sample information Sequencing quality control
Assembly-free analysis Read-level taxonomic profiling Gene screening
Assembly-based analysis Assembly quality assessment Genome bin quality & Taxonomic assignment Genome bin quality distribution Phylogenomic tree of genome bins Predicted ORF metrics Gene-level taxonomic profiling Gene functional annotation profiles Resistome annotation profiles

Sample information

Sample ID DRR317920_DRR317943
Sample Accession DRR317920 Sequencing Platform ILLUMINA Read Count 192530 Base Count 50655752
Sample Accession DRR317943 Sequencing Platform OXFORD_NANOPORE Read Count 120751 Base Count 380028639
Bioproject ID PRJDB12113 Scientific Name human metagenome
Read Length N50 4972 Reads < 1 kb (%) 0.247128388170698
Sampling Context cerebrospinal fluid Host Health / Disease meningitis
Study Title Metagenomics for pathogens detection from pediatric patients with meningitis

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening

Not Available
Not Available
Not Available


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Not Available

Genome bin quality distribution

Not Available

Phylogenomic tree of genome bins

Not Available


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Gene functional annotation profiles

Resistome annotation profiles