Sample information Sequencing quality control
Assembly-free analysis Read-level taxonomic profiling Gene screening
Assembly-based analysis Assembly quality assessment Genome bin quality & Taxonomic assignment Genome bin quality distribution Phylogenomic tree of genome bins Predicted ORF metrics Gene-level taxonomic profiling Gene functional annotation profiles Resistome annotation profiles

Sample information

Sample ID DRR317917_DRR317940
Sample Accession DRR317917 Sequencing Platform ILLUMINA Read Count 398421 Base Count 104567013
Sample Accession DRR317940 Sequencing Platform OXFORD_NANOPORE Read Count 195313 Base Count 610085634
Bioproject ID PRJDB12113 Scientific Name human metagenome
Read Length N50 4819 Reads < 1 kb (%) 0.228801974266946
Sampling Context cerebrospinal fluid Host Health / Disease meningitis
Study Title Metagenomics for pathogens detection from pediatric patients with meningitis

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening

Not Available
Not Available
Not Available


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Not Available

Genome bin quality distribution

Not Available

Phylogenomic tree of genome bins

Not Available


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Gene functional annotation profiles

Resistome annotation profiles