Sample information

Sample ID SRR19505639_SRR19505636
Sample Accession SRR19505639 Sequencing Platform ILLUMINA Read Count 38780400 Base Count 11634120000
Sample Accession SRR19505636 Sequencing Platform PACBIO_SMRT Read Count 704599 Base Count 6255542299
Bioproject ID PRJNA841170 Scientific Name human gut metagenome
Read Length N50 12082 Reads < 1 kb (%) 0.081714563886693
Sampling Context stool Host Health / Disease healthy
Study Title Benchmarking de novo assembly methods on metagenomic sequencing data

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Gene functional annotation profiles

Resistome annotation profiles