Sample information

Sample ID SRR12401434_SRR12401424
Sample Accession SRR12401434 Sequencing Platform ILLUMINA Read Count 4382275 Base Count 642019186
Sample Accession SRR12401424 Sequencing Platform OXFORD_NANOPORE Read Count 72006 Base Count 180483675
Bioproject ID PRJNA655185 Scientific Name human gut metagenome
Read Length N50 3004 Reads < 1 kb (%) 0.0803821903730245
Sampling Context rectal swab Host Health / Disease healthy
Study Title Metagenomic Next-Generation Sequencing of Rectal Swabs for ARO Surveillance

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Gene functional annotation profiles

Resistome annotation profiles