Sample information Sequencing quality control
Assembly-free analysis Read-level taxonomic profiling Gene screening
Assembly-based analysis Assembly quality assessment Genome bin quality & Taxonomic assignment Genome bin quality distribution Phylogenomic tree of genome bins Predicted ORF metrics Gene-level taxonomic profiling Gene functional annotation profiles Resistome annotation profiles

Sample information

Sample ID ERR6752168_ERR6713812
Sample Accession ERR6752168 Sequencing Platform ILLUMINA Read Count 67572360 Base Count 10135854000
Sample Accession ERR6713812 Sequencing Platform OXFORD_NANOPORE Read Count 100914 Base Count 428994441
Bioproject ID PRJEB47445 Scientific Name metagenome
Read Length N50 5889 Reads < 1 kb (%) 0.0503894405137047
Sampling Context stool Host Health / Disease obese
Study Title Exploring semi-quantitative metagenomics studies using Oxford Nanopore sequencing : a computational and experimental protocol

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling

Gene functional annotation profiles

Not Available
Not Available
Not Available
Not Available

Resistome annotation profiles

Not Available
Not Available
Not Available
Not Available