Sample information

Sample ID ERR5260617
Sample Accession ERR5260617 Sequencing Platform OXFORD_NANOPORE Read Count 172 Base Count 482363
Bioproject ID PRJEB42910 Scientific Name metagenome
Read Length N50 5114 Reads < 1 kb (%) 0.436046511627907
Sampling Context knee sonication fluid Host Health / Disease prosthetic joint infection
Study Title Optimization of prosthetic joint infection sample DNA extraction for Nanopore sequencing

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Gene screening

Not Available


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Not Available

Genome bin quality distribution

Not Available

Phylogenomic tree of genome bins

Not Available


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling