Sample information

Sample ID ERR11635533
Sample Accession ERR11635533 Sequencing Platform OXFORD_NANOPORE Read Count 28508 Base Count 103551131
Bioproject ID PRJEB61294 Scientific Name metagenome
Read Length N50 3855 Reads < 1 kb (%) 0.00389364388943455
Sampling Context bronchoalveolar lavage fluid Host Health / Disease respiratory failure;pneumonia
Study Title Viral, Bacterial and Fungal Metagenomic protocol

Sequencing quality control


Assembly-free analysis

Read-level taxonomic profiling

Not Available

Gene screening


Assembly-based analysis

Assembly quality assessment

Genome-centric

Genome bin quality & Taxonomic assignment

Genome Bin ID Quality Tier Completeness (%) Contamination (%) Genome Size (Mb) N50 (kb) Contig Count More Information GC Content (%) Taxonomy Closest Reference

Genome bin quality distribution

Phylogenomic tree of genome bins


Gene-centric

Predicted ORF metrics

Gene-level taxonomic profiling