Detail

Basic Information

GTO ID GTD0004
Accession GSE104552
Altered gene HTT
Gene xrefs Gene ID: 3064
Gene symbol: HTT
Ensembl ID: ENSG00000197386
Gene perturbation-related omics dataset PerturbAtlas | PertOrg
Treatment siCGA/UCG trinucleotide repeat (TNR)
RNA design information S: CAGCAGCAGCAGCAGCAGCdAdA. and AS: GCUGCUGCUGCUGCUGCUGTT.
Control GSM2803238;GSM2803239
Case GSM2803242;GSM2803243
Disease Cancer
Disease information Disease group: Cancer
Definition: A disease of cellular proliferation that is malignant and primary, characterized by uncontrolled cellular proliferation, local cell invasion and metastasis.
Xref: DO:162 | EFO:0000616 | HPO:HP:0002664 | ICD10:C00-D48.9 | MONDO:0005070 | MSH:D009369 | NCI:C3262
Organism Homo sapiens
Tissue/Cell type Ovary
Characteristics siCGA/UCG trinucleotide repeat (TNR)
Strategy RNA-seq
Platform GPL20301

Differential genes

Gene Name AveExpr Control AveExpr Case Log2FC P-value Adjusted P-value Regulation Boxplot

Volcano plot

Heatmap

Enriched regulations/functions/pathways


TF Regulation Gene Ratio Bg Ratio P-value Adjusted P-value Enriched Gene Count

ID Terms Size ES NES P-value Adjusted P-value Plot


Differential cell type markers

Cell Type Source Regulation Gene Ratio Bg Ratio Hypergeometric P-value Adjusted P-value Marker Gene