Perturbation information

Perturbed Gene Tlr4 LocusTag - Type of Gene protein-coding
Description toll-like receptor 4
Edit Type knockout
Organism Mus_musculus
Tissue Type small intestine
Characteristics genotype: ColVIcre-MyD88F/F-RosamTmG
Cell Type intestinal mesenchymal cells
Control | Case GSM3370199;GSM3370200;GSM3370201 GSM3370196;GSM3370197;GSM3370198
Data Source GEO
Accession GSE119341
Data Type RNA-Seq
Pubmed ID 30650348

Differential genes

Gene Name AveExpr Control AveExpr Case Log2FC P-value Adjusted P-value Regulation Boxplot

Volcano plot

Heatmap

Enriched regulations/functions/pathways


TF Regulation Gene Ratio Bg Ratio P-value Adjusted P-value Enriched Gene Count

ID Terms Size ES NES P-value Adjusted P-value Plot


Differential cell type markers

Cell Type Source Regulation Gene Ratio Bg Ratio Hypergeometric P-value Adjusted P-value Marker Gene