"studyid","accession","case_sample","tissue","platform","species","Series_pubmed_id","X.Sample_characteristics_ch1" "Ods000095","GSE101770","GSM2715271","Liver","RNA-Seq","Homo sapiens","28878125","""cell type: secondary hepatic organoids""_""day: > day 62""" "Ods000096","GSE101770","GSM2715272","Liver","RNA-Seq","Homo sapiens","28878125","""cell type: secondary hepatic organoids""_""day: > day 62""" "Ods000097","GSE101770","GSM2715274","Liver","RNA-Seq","Homo sapiens","28878125","""cell type: primary hepatic organoids""_""day: > day 21""" "Ods000098","GSE101770","GSM2715275","Liver","RNA-Seq","Homo sapiens","28878125","""cell type: primary hepatic organoids""_""day: > day 21""" "Ods000106","GSE102727","GSM2743816","Retina","RNA-Seq","Mus musculus","29233554","""age: D18""_""tissue: ESC derived Retina organoids""_""growth culture: rotating-walled bioreactor (RWB)""" "Ods000107","GSE102727","GSM2743817","Retina","RNA-Seq","Mus musculus","29233554","""age: D18""_""tissue: ESC derived Retina organoids""_""growth culture: rotating-walled bioreactor (RWB)""" "Ods000108","GSE102727","GSM2743818","Retina","RNA-Seq","Mus musculus","29233554","""age: D22""_""tissue: ESC derived Retina organoids""_""growth culture: rotating-walled bioreactor (RWB)""" "Ods000109","GSE102727","GSM2743819","Retina","RNA-Seq","Mus musculus","29233554","""age: D22""_""tissue: ESC derived Retina organoids""_""growth culture: rotating-walled bioreactor (RWB)""" "Ods000110","GSE102727","GSM2743820","Retina","RNA-Seq","Mus musculus","29233554","""age: D22""_""tissue: ESC derived Retina organoids""_""growth culture: rotating-walled bioreactor (RWB)""" "Ods000111","GSE102727","GSM2743821","Retina","RNA-Seq","Mus musculus","29233554","""age: D25""_""tissue: ESC derived Retina organoids""_""growth culture: rotating-walled bioreactor (RWB)""" "Ods000112","GSE102727","GSM2743822","Retina","RNA-Seq","Mus musculus","29233554","""age: D25""_""tissue: ESC derived Retina organoids""_""growth culture: rotating-walled bioreactor (RWB)""" "Ods000113","GSE102727","GSM2743823","Retina","RNA-Seq","Mus musculus","29233554","""age: D25""_""tissue: ESC derived Retina organoids""_""growth culture: rotating-walled bioreactor (RWB)""" "Ods000114","GSE102727","GSM2743824","Retina","RNA-Seq","Mus musculus","29233554","""age: D18""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, dissected (SSCd)""" "Ods000115","GSE102727","GSM2743825","Retina","RNA-Seq","Mus musculus","29233554","""age: D18""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, dissected (SSCd)""" "Ods000116","GSE102727","GSM2743826","Retina","RNA-Seq","Mus musculus","29233554","""age: D18""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, dissected (SSCd)""" "Ods000117","GSE102727","GSM2743827","Retina","RNA-Seq","Mus musculus","29233554","""age: D22""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, dissected (SSCd)""" "Ods000118","GSE102727","GSM2743828","Retina","RNA-Seq","Mus musculus","29233554","""age: D22""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, dissected (SSCd)""" "Ods000119","GSE102727","GSM2743829","Retina","RNA-Seq","Mus musculus","29233554","""age: D22""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, dissected (SSCd)""" "Ods000120","GSE102727","GSM2743830","Retina","RNA-Seq","Mus musculus","29233554","""age: D28""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, dissected (SSCd)""" "Ods000121","GSE102727","GSM2743831","Retina","RNA-Seq","Mus musculus","29233554","""age: D28""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, dissected (SSCd)""" "Ods000122","GSE102727","GSM2743832","Retina","RNA-Seq","Mus musculus","29233554","""age: D28""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, dissected (SSCd)""" "Ods000123","GSE102727","GSM2743833","Retina","RNA-Seq","Mus musculus","29233554","""age: D18""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, intact (SSCi)""" "Ods000124","GSE102727","GSM2743834","Retina","RNA-Seq","Mus musculus","29233554","""age: D18""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, intact (SSCi)""" "Ods000125","GSE102727","GSM2743835","Retina","RNA-Seq","Mus musculus","29233554","""age: D25""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, intact (SSCi)""" "Ods000126","GSE102727","GSM2743836","Retina","RNA-Seq","Mus musculus","29233554","""age: D25""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, intact (SSCi)""" "Ods000127","GSE102727","GSM2743837","Retina","RNA-Seq","Mus musculus","29233554","""age: D32""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, intact (SSCi)""" "Ods000128","GSE102727","GSM2743838","Retina","RNA-Seq","Mus musculus","29233554","""age: D32""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, intact (SSCi)""" "Ods000129","GSE102727","GSM2743839","Retina","RNA-Seq","Mus musculus","29233554","""age: D32""_""tissue: ESC derived Retina organoids""_""growth culture: static suspension culture, intact (SSCi)""" "Ods000156","GSE102795","GSM2746503","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D0""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000157","GSE102795","GSM2746504","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D0""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000158","GSE102795","GSM2746505","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D0""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000159","GSE102795","GSM2746506","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D4""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000160","GSE102795","GSM2746507","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D4""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000161","GSE102795","GSM2746508","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D4""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000162","GSE102795","GSM2746509","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D7""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000163","GSE102795","GSM2746510","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D7""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000164","GSE102795","GSM2746511","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D7""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000165","GSE102795","GSM2746512","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D10""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000166","GSE102795","GSM2746513","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D10""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000167","GSE102795","GSM2746514","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D10""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000168","GSE102795","GSM2746515","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D12""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000169","GSE102795","GSM2746516","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D12""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000170","GSE102795","GSM2746517","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D12""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000171","GSE102795","GSM2746518","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D15""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000172","GSE102795","GSM2746519","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D15""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000173","GSE102795","GSM2746520","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D15""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000174","GSE102795","GSM2746521","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D18""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000175","GSE102795","GSM2746522","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D18""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000176","GSE102795","GSM2746523","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D18""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000177","GSE102795","GSM2746524","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D22""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000178","GSE102795","GSM2746525","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D22""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000179","GSE102795","GSM2746526","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D22""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000180","GSE102795","GSM2746527","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D25""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000181","GSE102795","GSM2746528","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D25""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000182","GSE102795","GSM2746529","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D25""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000183","GSE102795","GSM2746530","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D32""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000184","GSE102795","GSM2746531","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D32""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000185","GSE102795","GSM2746532","Retina","RNA-Seq","Mus musculus","31631019","""cell type source: Nrl-GFP wild-type (WT) induced pluripotent stem cells (iPSC)""_""age: D32""_""tissue/cell type: iPSC-derived Retina organoids""" "Ods000187","GSE103826","GSM2782496","Retina","RNA-Seq","Homo sapiens","27116668","""age: d37""_""tissue: GFP positive neural retina cells""_""cell type: flow sorted CRXp-GFP positive cells at 37 days post neural retina induction""" "Ods000188","GSE103826","GSM2782497","Retina","RNA-Seq","Homo sapiens","27116668","""age: d48""_""tissue: GFP positive neural retina cells""_""cell type: flow sorted CRXp-GFP positive cells at 48 days post neural retina induction""" "Ods000189","GSE103826","GSM2782498","Retina","RNA-Seq","Homo sapiens","27116668","""age: d67""_""tissue: GFP positive neural retina cells""_""cell type: flow sorted CRXp-GFP positive cells at 67 days post neural retina induction""" "Ods000190","GSE103826","GSM2782499","Retina","RNA-Seq","Homo sapiens","27116668","""age: d90""_""tissue: GFP positive neural retina cells""_""cell type: flow sorted CRXp-GFP positive cells at 90 days post neural retina induction""" "Ods000191","GSE103826","GSM2782500","Retina","RNA-Seq","Homo sapiens","27116668","""age: d134""_""tissue: GFP positive neural retina cells""_""cell type: flow sorted CRXp-GFP positive cells at 134 days post neural retina induction""" "Ods000192","GSE103826","GSM2782501","Retina","RNA-Seq","Homo sapiens","27116668","""age: d220""_""tissue: GFP positive neural retina cells""_""cell type: flow sorted CRXp-GFP positive cells at 220 days post neural retina induction""" "Ods000298","GSE106245","GSM2832723","Cerebral cortex","RNA-Seq","Homo sapiens","29856954|30639214|33319914","""cell line: H9""_""time point: week 0""" "Ods000299","GSE106245","GSM2832724","Cerebral cortex","RNA-Seq","Homo sapiens","29856954|30639214|33319914","""cell line: H9""_""time point: week 0""" "Ods000300","GSE106245","GSM2832725","Cerebral cortex","RNA-Seq","Homo sapiens","29856954|30639214|33319914","""cell line: H9""_""time point: week 1""" "Ods000301","GSE106245","GSM2832726","Cerebral cortex","RNA-Seq","Homo sapiens","29856954|30639214|33319914","""cell line: H9""_""time point: week 1""" "Ods000302","GSE106245","GSM2832727","Cerebral cortex","RNA-Seq","Homo sapiens","29856954|30639214|33319914","""cell line: H9""_""time point: week 2""" "Ods000303","GSE106245","GSM2832728","Cerebral cortex","RNA-Seq","Homo sapiens","29856954|30639214|33319914","""cell line: H9""_""time point: week 2""" "Ods000304","GSE106245","GSM2832729","Cerebral cortex","RNA-Seq","Homo sapiens","29856954|30639214|33319914","""cell line: H9""_""time point: week 3""" "Ods000305","GSE106245","GSM2832730","Cerebral cortex","RNA-Seq","Homo sapiens","29856954|30639214|33319914","""cell line: H9""_""time point: week 3""" "Ods000306","GSE106245","GSM2832731","Cerebral cortex","RNA-Seq","Homo sapiens","29856954|30639214|33319914","""cell line: H9""_""time point: week 4""" "Ods000307","GSE106245","GSM2832732","Cerebral cortex","RNA-Seq","Homo sapiens","29856954|30639214|33319914","""cell line: H9""_""time point: week 4""" "Ods000308","GSE106245","GSM2832733","Cerebral cortex","RNA-Seq","Homo sapiens","29856954|30639214|33319914","""cell line: H9""_""time point: week 5""" "Ods000309","GSE106245","GSM2832734","Cerebral cortex","RNA-Seq","Homo sapiens","29856954|30639214|33319914","""cell line: H9""_""time point: week 5""" "Ods000315","GSE106245","GSM2867936","Cerebral cortex","scRNA-Seq","Homo sapiens","29856954|30639214|33319914","""cell line: H9""_""time point: week 5""" "Ods000456","GSE108116","GSM3398394","Cerebral cortex","RNA-Seq","Homo sapiens","30718900","""cell type: Human Organoid D45""_""cell line: derived from H9 (day 45)""_""genotype/variation: Control""" "Ods000457","GSE108116","GSM3398395","Cerebral cortex","RNA-Seq","Homo sapiens","30718900","""cell type: Human Organoid D45""_""cell line: derived from H9 (day 45)""_""genotype/variation: Control""" "Ods000461","GSE108291","GSM3149442","Kidney","scRNA-Seq","Homo sapiens","31118232","""cell type: ES-derived kidney organoid""_""day of differentiation: 25""" "Ods000470","GSE108391","GSM2897301","Stomach","RNA-Seq","Homo sapiens","29472484","""sample type: RNA from 3770-1032 PDOs""_""passage #: passage 04""" "Ods000471","GSE108391","GSM2897302","Stomach","RNA-Seq","Homo sapiens","29472484","""sample type: RNA from 3770-1032 PDOs""_""passage #: passage 07""" "Ods000472","GSE108391","GSM2897303","Stomach","RNA-Seq","Homo sapiens","29472484","""sample type: RNA from 4164-1001 PDOs""_""passage #: passage 06""" "Ods000473","GSE108391","GSM2897304","Stomach","RNA-Seq","Homo sapiens","29472484","""sample type: RNA from 4164-1001 PDOs""_""passage #: passage 10""" "Ods000474","GSE108391","GSM2897305","Stomach","RNA-Seq","Homo sapiens","29472484","""sample type: RNA from 4164-1010 PDOs""_""passage #: passage 07""" "Ods000475","GSE108391","GSM2897306","Stomach","RNA-Seq","Homo sapiens","29472484","""sample type: RNA from 4164-1010 PDOs""_""passage #: passage 09""" "Ods000476","GSE108391","GSM2897307","Stomach","RNA-Seq","Homo sapiens","29472484","""sample type: RNA from 3994-055 PDOs""_""passage #: passage 05""" "Ods000477","GSE108391","GSM2897308","Stomach","RNA-Seq","Homo sapiens","29472484","""sample type: RNA from 3994-055 PDOs""_""passage #: passage 10""" "Ods000478","GSE108391","GSM2897309","Stomach","RNA-Seq","Homo sapiens","29472484","""sample type: RNA from 3994-071 PDOs""_""passage #: passage 05""" "Ods000479","GSE108391","GSM2897310","Stomach","RNA-Seq","Homo sapiens","29472484","""sample type: RNA from 3994-071 PDOs""_""passage #: passage 12""" "Ods000488","GSE108854","GSM2915020","Pancreas","RNA-Seq","Homo sapiens","29539434","""cell type: ALDH high cells""_""developmental stage: adult""_""tissue: Organoids derived from adult pancreatic tissue""" "Ods000489","GSE108854","GSM2915021","Pancreas","RNA-Seq","Homo sapiens","29539434","""cell type: ALDH high cells""_""developmental stage: adult""_""tissue: Organoids derived from adult pancreatic tissue""" "Ods000490","GSE108854","GSM2915022","Pancreas","RNA-Seq","Homo sapiens","29539434","""cell type: ALDH high cells""_""developmental stage: adult""_""tissue: Organoids derived from adult pancreatic tissue""" "Ods000491","GSE108854","GSM2915023","Pancreas","RNA-Seq","Homo sapiens","29539434","""cell type: ALDH high cells""_""developmental stage: fetal""_""tissue: Organoids derived from fetal pancreatic tissue""" "Ods000492","GSE108854","GSM2915024","Pancreas","RNA-Seq","Homo sapiens","29539434","""cell type: ALDH high cells""_""developmental stage: fetal""_""tissue: Organoids derived from fetal pancreatic tissue""" "Ods000493","GSE108854","GSM2915025","Pancreas","RNA-Seq","Homo sapiens","29539434","""cell type: ALDH high cells""_""developmental stage: fetal""_""tissue: Organoids derived from fetal pancreatic tissue""" "Ods000513","GSE109566","GSM2946662","Urinary tract","RNA-Seq","Mus musculus",NA,"""strain: C57BL/6J.OlaHsd""_""tissue: bladder""_""cell type: urothelial organoid""_""sampleID: 60""" "Ods000514","GSE109566","GSM2946663","Urinary tract","RNA-Seq","Mus musculus",NA,"""strain: C57BL/6J.OlaHsd""_""tissue: bladder""_""cell type: urothelial organoid""_""sampleID: 97""" "Ods000515","GSE109566","GSM2946664","Urinary tract","RNA-Seq","Mus musculus",NA,"""strain: C57BL/6J.OlaHsd""_""tissue: bladder""_""cell type: urothelial organoid""_""sampleID: 98""" "Ods000516","GSE109566","GSM2946665","Urinary tract","RNA-Seq","Mus musculus",NA,"""strain: C57BL/6J.OlaHsd""_""tissue: bladder""_""cell type: urothelial organoid""_""sampleID: 60""" "Ods000517","GSE109566","GSM2946666","Urinary tract","RNA-Seq","Mus musculus",NA,"""strain: C57BL/6J.OlaHsd""_""tissue: bladder""_""cell type: urothelial organoid""_""sampleID: 97""" "Ods000518","GSE109566","GSM2946667","Urinary tract","RNA-Seq","Mus musculus",NA,"""strain: C57BL/6J.OlaHsd""_""tissue: bladder""_""cell type: urothelial organoid""_""sampleID: 98""" "Ods000523","GSE109718","GSM3103088","Kidney","RNA-Seq","Homo sapiens","29779890","""treatment: Yes_Vegf""_""tissue: WA09 (H9) embryonic stem cells""" "Ods000524","GSE109718","GSM3103089","Kidney","RNA-Seq","Homo sapiens","29779890","""treatment: No_Vegf""_""tissue: WA09 (H9) embryonic stem cells""" "Ods000653","GSE111992","GSM3048779","Glomerulus","RNA-Seq","Homo sapiens","30514835","""cell type: Day 25 kidney organoid derived glomeruli""_""clone: human iPSC line CRL1502 (clone C32)""_""genotype: WT""" "Ods000654","GSE111992","GSM3048780","Glomerulus","RNA-Seq","Homo sapiens","30514835","""cell type: Day 25 kidney organoid derived glomeruli""_""clone: human iPSC line CRL1502 (clone C32)""_""genotype: WT""" "Ods000655","GSE111992","GSM3048781","Glomerulus","RNA-Seq","Homo sapiens","30514835","""cell type: Day 25 kidney organoid derived glomeruli""_""clone: human iPSC line CRL1502 (clone C32)""_""genotype: WT""" "Ods000656","GSE111992","GSM3048782","Glomerulus","RNA-Seq","Homo sapiens","30514835","""cell type: organoid-derived podocytes grown out for 3 days from day 25 kidney organoid derived glomeruli""_""clone: human iPSC line CRL1502 (clone C32)""_""genotype: WT""" "Ods000657","GSE111992","GSM3048783","Glomerulus","RNA-Seq","Homo sapiens","30514835","""cell type: organoid-derived podocytes grown out for 3 days from day 25 kidney organoid derived glomeruli""_""clone: human iPSC line CRL1502 (clone C32)""_""genotype: WT""" "Ods000658","GSE111992","GSM3048784","Glomerulus","RNA-Seq","Homo sapiens","30514835","""cell type: organoid-derived podocytes grown out for 3 days from day 25 kidney organoid derived glomeruli""_""clone: human iPSC line CRL1502 (clone C32)""_""genotype: WT""" "Ods000974","GSE114113","GSM3132943","Small intestine","RNA-Seq","Mus musculus","29945941","""tissue: Small intestinal organoids""_""cell type enrichment: Stem cell enriched (+CHIR+VPA)""_""assay: RNA-seq""_""chip antibody: NA""" "Ods000975","GSE114113","GSM3132948","Small intestine","RNA-Seq","Mus musculus","29945941","""tissue: Small intestinal organoids""_""cell type enrichment: Stem cell enriched (+CHIR+VPA)""_""assay: RNA-seq""_""chip antibody: NA""" "Ods000976","GSE114113","GSM3132953","Small intestine","RNA-Seq","Mus musculus","29945941","""tissue: Small intestinal organoids""_""cell type enrichment: Stem cell enriched (+CHIR+VPA)""_""assay: RNA-seq""_""chip antibody: NA""" "Ods000977","GSE114113","GSM3132958","Small intestine","RNA-Seq","Mus musculus","29945941","""tissue: Small intestinal organoids""_""cell type enrichment: Stem cell enriched (+CHIR+VPA)""_""assay: RNA-seq""_""chip antibody: NA""" "Ods000978","GSE114113","GSM3132964","Small intestine","RNA-Seq","Mus musculus","29945941","""tissue: Small intestinal organoids""_""cell type enrichment: Differentiated (-Rspondin)""_""assay: RNA-seq""_""chip antibody: NA""" "Ods000979","GSE114113","GSM3132970","Small intestine","RNA-Seq","Mus musculus","29945941","""tissue: Small intestinal organoids""_""cell type enrichment: Differentiated (-Rspondin)""_""assay: RNA-seq""_""chip antibody: NA""" "Ods000980","GSE114113","GSM3132975","Small intestine","RNA-Seq","Mus musculus","29945941","""tissue: Small intestinal organoids""_""cell type enrichment: Differentiated (-Rspondin)""_""assay: RNA-seq""_""chip antibody: NA""" "Ods000981","GSE114113","GSM3132980","Small intestine","RNA-Seq","Mus musculus","29945941","""tissue: Small intestinal organoids""_""cell type enrichment: Differentiated (-Rspondin)""_""assay: RNA-seq""_""chip antibody: NA""" "Ods000982","GSE114113","GSM3132986","Small intestine","RNA-Seq","Mus musculus","29945941","""tissue: Small intestinal organoids""_""cell type enrichment: Normal (ENR medium)""_""assay: RNA-seq""_""chip antibody: NA""" "Ods000983","GSE114113","GSM3132991","Small intestine","RNA-Seq","Mus musculus","29945941","""tissue: Small intestinal organoids""_""cell type enrichment: Normal (ENR medium)""_""assay: RNA-seq""_""chip antibody: NA""" "Ods000984","GSE114113","GSM3132996","Small intestine","RNA-Seq","Mus musculus","29945941","""tissue: Small intestinal organoids""_""cell type enrichment: Normal (ENR medium)""_""assay: RNA-seq""_""chip antibody: NA""" "Ods000985","GSE114113","GSM3133001","Small intestine","RNA-Seq","Mus musculus","29945941","""tissue: Small intestinal organoids""_""cell type enrichment: Normal (ENR medium)""_""assay: RNA-seq""_""chip antibody: NA""" "Ods000987","GSE114113","GSM3133003","Small intestine","RNA-Seq","Mus musculus","29945941","""tissue: Small intestinal organoids""_""cell type enrichment: Normal (ENR medium)""_""assay: RNA-seq""_""chip antibody: NA""" "Ods001077","GSE115112","GSM3165452","Breast","RNA-Seq","Homo sapiens","30993572","""cell type: epithelial""_""treatment: control""_""time: 0 hr""" "Ods001078","GSE115112","GSM3165453","Breast","RNA-Seq","Homo sapiens","30993572","""cell type: epithelial""_""treatment: control""_""time: 0 hr""" "Ods001079","GSE115112","GSM3165454","Breast","RNA-Seq","Homo sapiens","30993572","""cell type: epithelial""_""treatment: control""_""time: 0 hr""" "Ods001080","GSE115112","GSM3165455","Breast","RNA-Seq","Homo sapiens","30993572","""cell type: epithelial""_""treatment: control""_""time: 0 hr""" "Ods001089","GSE115112","GSM3165464","Breast","RNA-Seq","Homo sapiens","30993572","""cell type: epithelial""_""treatment: primary organoid""_""time: NA""" "Ods001090","GSE115112","GSM3165465","Breast","RNA-Seq","Homo sapiens","30993572","""cell type: epithelial""_""treatment: control""_""time: 0 hr""" "Ods001091","GSE115112","GSM3165466","Breast","RNA-Seq","Homo sapiens","30993572","""cell type: epithelial""_""treatment: control""_""time: 0 hr""" "Ods001092","GSE115112","GSM3165467","Breast","RNA-Seq","Homo sapiens","30993572","""cell type: epithelial""_""treatment: control""_""time: 0 hr""" "Ods001093","GSE115112","GSM3165468","Breast","RNA-Seq","Homo sapiens","30993572","""cell type: epithelial""_""treatment: control""_""time: 0 hr""" "Ods001102","GSE115112","GSM3165477","Breast","RNA-Seq","Homo sapiens","30993572","""cell type: epithelial""_""treatment: primary organoid""_""time: NA""" "Ods001115","GSE115112","GSM3165490","Breast","RNA-Seq","Homo sapiens","30993572","""cell type: epithelial""_""treatment: primary organoid""_""time: NA""" "Ods001125","GSE115853","GSM3191854","Liver","RNA-Seq","Homo sapiens","31332348","""cell type: hiHep hepatocyte-like cells""_""mutation: GFP_Control""_""culture time: 16 days""_""""" "Ods001126","GSE115853","GSM3191855","Liver","RNA-Seq","Homo sapiens","31332348","""cell type: hiHep hepatocyte-like cells""_""mutation: GFP_Control""_""culture time: 16 days""_""""" "Ods001135","GSE115853","GSM3557956","Liver","RNA-Seq","Homo sapiens","31332348","""cell type: proliferating hepatocytes""_""culture time: Cultured primary hepatocytes""_""mutation: GFP_Control""_""culture time: 10d""" "Ods001169","GSE115958","GSM3196006","Intestine","scRNA-Seq","Mus musculus","31019299","""tissue: intestinal organoids day 5""_""strain: C57BL/6""_""genotype: wild type""_""age: 10 weeks""" "Ods001182","GSE116431","GSM2872795","Mammary gland","RNA-Seq","Mus musculus","30080881","""tissue: Mammary epithelium""_""background strain: C57BL/6""_""cell type from which organoid was derived: Luminal""_""phenotype: Wild-type""_""gender: female""" "Ods001184","GSE116431","GSM2872797","Mammary gland","RNA-Seq","Mus musculus","30080881","""tissue: Mammary epithelium""_""background strain: C57BL/6""_""cell type from which organoid was derived: Basal""_""phenotype: Wild-type""_""gender: female""" "Ods001186","GSE116431","GSM2872799","Mammary gland","RNA-Seq","Mus musculus","30080881","""tissue: Mammary epithelium""_""background strain: C57BL/6""_""cell type from which organoid was derived: Luminal""_""phenotype: Wild-type""_""gender: female""" "Ods001188","GSE116431","GSM2872801","Mammary gland","RNA-Seq","Mus musculus","30080881","""tissue: Mammary epithelium""_""background strain: C57BL/6""_""cell type from which organoid was derived: Luminal""_""phenotype: Wild-type""_""gender: female""" "Ods001190","GSE116431","GSM2872803","Mammary gland","RNA-Seq","Mus musculus","30080881","""tissue: Mammary epithelium""_""background strain: C57BL/6""_""cell type from which organoid was derived: Basal""_""phenotype: Wild-type""_""gender: female""" "Ods001228","GSE116936","GSM3264576","Colon","RNA-Seq","Homo sapiens","30190207","""cell type: Human colonic epithelial stem cells""_""passage: 7""" "Ods001229","GSE116936","GSM3264577","Colon","RNA-Seq","Homo sapiens","30190207","""cell type: Human colonic epithelial stem cells""_""passage: 7""" "Ods001230","GSE116936","GSM3264578","Colon","RNA-Seq","Homo sapiens","30190207","""cell type: Human colonic epithelial stem cells""_""passage: 7""" "Ods001231","GSE116936","GSM3264579","Colon","RNA-Seq","Homo sapiens","30190207","""cell type: Human colonic epithelial stem cells""_""passage: 7""" "Ods001232","GSE116936","GSM3264580","Colon","RNA-Seq","Homo sapiens","30190207","""cell type: Human colonic epithelial stem cells""_""passage: 7""" "Ods001233","GSE116936","GSM3264581","Colon","RNA-Seq","Homo sapiens","30190207","""cell type: Human colonic epithelial stem cells""_""passage: 7""" "Ods001234","GSE116936","GSM3264582","Colon","RNA-Seq","Homo sapiens","30190207","""cell type: Human colonic epithelial stem cells""_""passage: 7""" "Ods001235","GSE116936","GSM3264583","Colon","RNA-Seq","Homo sapiens","30190207","""cell type: Human colonic epithelial stem cells""_""passage: 7""" "Ods001236","GSE116936","GSM3264584","Colon","RNA-Seq","Homo sapiens","30190207","""cell type: Human colonic epithelial stem cells""_""passage: 7""" "Ods001237","GSE116936","GSM3264585","Colon","RNA-Seq","Homo sapiens","30190207","""cell type: Human colonic epithelial stem cells""_""passage: 7""" "Ods001238","GSE116936","GSM3264586","Colon","RNA-Seq","Homo sapiens","30190207","""cell type: Human colonic epithelial stem cells""_""passage: 7""" "Ods001239","GSE116936","GSM3264587","Colon","RNA-Seq","Homo sapiens","30190207","""cell type: Human colonic epithelial stem cells""_""passage: 7""" "Ods001250","GSE117431","GSM3294584","Prostate","RNA-Seq","Mus musculus","30930119","""tissue: organoid""_""genotype: Control""" "Ods001251","GSE117431","GSM3294585","Prostate","RNA-Seq","Mus musculus","30930119","""tissue: organoid""_""genotype: Control""" "Ods001252","GSE117431","GSM3294586","Prostate","RNA-Seq","Mus musculus","30930119","""tissue: organoid""_""genotype: Control""" "Ods001304","GSE117589","GSM3304324","Brain","RNA-Seq","Homo sapiens","30699343","""tissue: cerebral organoids""_""apoe genotype: E4E4_CTR""_""coriell #: AG10788""" "Ods001305","GSE117589","GSM3304325","Brain","RNA-Seq","Homo sapiens","30699343","""tissue: cerebral organoids""_""apoe genotype: E4E4_CTR""_""coriell #: AG10788""" "Ods001308","GSE117589","GSM3304328","Brain","RNA-Seq","Homo sapiens","30699343","""tissue: cerebral organoids""_""apoe genotype: E4E4_CTR""_""coriell #: AG10788""" "Ods001516","GSE119274","GSM3362986","Retina","RNA-Seq","Homo sapiens",NA,"""tissue: retinal organoid""_""culture time: 15 days""" "Ods001517","GSE119274","GSM3362987","Retina","RNA-Seq","Homo sapiens",NA,"""tissue: retinal organoid""_""culture time: 15 days""" "Ods001518","GSE119274","GSM3362988","Retina","RNA-Seq","Homo sapiens",NA,"""tissue: retinal organoid""_""culture time: 15 days""" "Ods001519","GSE119274","GSM3362989","Retina","RNA-Seq","Homo sapiens",NA,"""tissue: retinal organoid""_""culture time: 30 days""" "Ods001520","GSE119274","GSM3362990","Retina","RNA-Seq","Homo sapiens",NA,"""tissue: retinal organoid""_""culture time: 30 days""" "Ods001521","GSE119274","GSM3362991","Retina","RNA-Seq","Homo sapiens",NA,"""tissue: retinal organoid""_""culture time: 30 days""" "Ods001522","GSE119274","GSM3362992","Retina","RNA-Seq","Homo sapiens",NA,"""tissue: retinal organoid""_""culture time: 85 days""" "Ods001523","GSE119274","GSM3362993","Retina","RNA-Seq","Homo sapiens",NA,"""tissue: retinal organoid""_""culture time: 94 days""" "Ods001524","GSE119274","GSM3362994","Retina","RNA-Seq","Homo sapiens",NA,"""tissue: retinal organoid""_""culture time: 94 days""" "Ods001525","GSE119274","GSM3362995","Retina","RNA-Seq","Homo sapiens",NA,"""tissue: retinal organoid""_""culture time: 194 days""" "Ods001526","GSE119274","GSM3362996","Retina","RNA-Seq","Homo sapiens",NA,"""tissue: retinal organoid""_""culture time: 195 days""" "Ods001527","GSE119274","GSM3362997","Retina","RNA-Seq","Homo sapiens",NA,"""tissue: retinal organoid""_""culture time: 195 days""" "Ods001528","GSE119274","GSM3362998","Retina","RNA-Seq","Homo sapiens",NA,"""tissue: retinal organoid""_""culture time: 258 days""" "Ods001529","GSE119274","GSM3362999","Retina","RNA-Seq","Homo sapiens",NA,"""tissue: retinal organoid""_""culture time: 259 days""" "Ods001530","GSE119274","GSM3363000","Retina","RNA-Seq","Homo sapiens",NA,"""tissue: retinal organoid""_""culture time: 259 days""" "Ods001570","GSE119354","GSM3371736","Intestine","RNA-Seq","Mus musculus","30254094","""tissue: intestinal epithelia""_""genotype: WT (Atg16l1 fl/fl)""_""stimulation: control""" "Ods001571","GSE119354","GSM3371737","Intestine","RNA-Seq","Mus musculus","30254094","""tissue: intestinal epithelia""_""genotype: WT (Atg16l1 fl/fl)""_""stimulation: control""" "Ods001574","GSE119354","GSM3371740","Intestine","RNA-Seq","Mus musculus","30254094","""tissue: intestinal epithelia""_""genotype: WT (Atg16l1 fl/fl)""_""stimulation: control""" "Ods001575","GSE119354","GSM3371741","Intestine","RNA-Seq","Mus musculus","30254094","""tissue: intestinal epithelia""_""genotype: WT (Atg16l1 fl/fl)""_""stimulation: control""" "Ods001586","GSE119861","GSM3386037","Brain","scRNA-Seq","Homo sapiens","32051547","""cell type: hESC derived cerebral organoid""_""treatment: mock treated""" "Ods001686","GSE120145","GSM3394856","Liver","RNA-Seq","Homo sapiens","31522975","""tissue: endoderm derived hepatic organoids (eHEPOs)""_""differentiation status: eHEPO EM""_""genotype: WT""" "Ods001687","GSE120145","GSM3394857","Liver","RNA-Seq","Homo sapiens","31522975","""tissue: endoderm derived hepatic organoids (eHEPOs)""_""differentiation status: eHEPO EM""_""genotype: WT""" "Ods001688","GSE120145","GSM3394858","Liver","RNA-Seq","Homo sapiens","31522975","""tissue: endoderm derived hepatic organoids (eHEPOs)""_""differentiation status: eHEPO DM""_""genotype: WT""" "Ods001690","GSE120145","GSM3394860","Liver","RNA-Seq","Homo sapiens","31522975","""tissue: endoderm derived hepatic organoids (eHEPOs)""_""differentiation status: eHEPO DM""_""genotype: WT""" "Ods001692","GSE120145","GSM3394862","Liver","RNA-Seq","Homo sapiens","31522975","""tissue: endoderm derived hepatic organoids (eHEPOs)""_""differentiation status: eHEPO EM""_""genotype: WT""" "Ods001693","GSE120145","GSM3394863","Liver","RNA-Seq","Homo sapiens","31522975","""tissue: endoderm derived hepatic organoids (eHEPOs)""_""differentiation status: eHEPO DM""_""genotype: WT""" "Ods001695","GSE120241","GSM3396584","Intestine","RNA-Seq","Mus musculus","31905853","""strain: C57BL/6""_""tissue: intestinal organoid""_""days: 50-day period of culture""_""protocol: NER culture medium +saline""" "Ods001696","GSE120241","GSM3396585","Intestine","RNA-Seq","Mus musculus","31905853","""strain: C57BL/6""_""tissue: intestinal organoid""_""days: 50-day period of culture""_""protocol: NER culture medium +saline""" "Ods001697","GSE120241","GSM3396586","Intestine","RNA-Seq","Mus musculus","31905853","""strain: C57BL/6""_""tissue: intestinal organoid""_""days: 50-day period of culture""_""protocol: NER culture medium +DMBA (Long)""" "Ods001698","GSE120241","GSM3396587","Intestine","RNA-Seq","Mus musculus","31905853","""strain: C57BL/6""_""tissue: intestinal organoid""_""days: 50-day period of culture""_""protocol: NER culture medium +DMBA (Long)""" "Ods001699","GSE120241","GSM3396588","Intestine","RNA-Seq","Mus musculus","31905853","""strain: C57BL/6""_""tissue: intestinal organoid""_""days: 50-day period of culture""_""protocol: NER+ Dosage-sensitive TAM (short)""" "Ods001700","GSE120241","GSM3396589","Intestine","RNA-Seq","Mus musculus","31905853","""strain: C57BL/6""_""tissue: intestinal organoid""_""days: 50-day period of culture""_""protocol: NER+ Dosage-sensitive TAM (short)""" "Ods001701","GSE120241","GSM3396590","Intestine","RNA-Seq","Mus musculus","31905853","""strain: C57BL/6""_""tissue: intestinal organoid""_""days: 50-day period of culture""_""protocol: NER+ Dosage-sensitive TAM (Long)""" "Ods001702","GSE120241","GSM3396591","Intestine","RNA-Seq","Mus musculus","31905853","""strain: C57BL/6""_""tissue: intestinal organoid""_""days: 50-day period of culture""_""protocol: NER+ Dosage-sensitive TAM (Long)""" "Ods001703","GSE120241","GSM3396592","Intestine","RNA-Seq","Mus musculus","31905853","""strain: C57BL/6""_""tissue: intestinal organoid""_""days: 50-day period of culture""_""protocol: NER+DMBA+TAM""" "Ods001704","GSE120241","GSM3396593","Intestine","RNA-Seq","Mus musculus","31905853","""strain: C57BL/6""_""tissue: intestinal organoid""_""days: 50-day period of culture""_""protocol: NER+DMBA+TAM""" "Ods001707","GSE121830","GSM3447561","Foregut-midgut boundary","RNA-Seq","Homo sapiens","31554966","""cell type: iPSC derived boundary organoid""_""region: Anterior part of micro-dissected organoid""_""culture period: day11 from undifferentiated iPSC""" "Ods001708","GSE121830","GSM3447562","Foregut-midgut boundary","RNA-Seq","Homo sapiens","31554966","""cell type: iPSC derived boundary organoid""_""region: Boundary part of micro-dissected organoid""_""culture period: day11 from undifferentiated iPSC""" "Ods001709","GSE121830","GSM3447563","Foregut-midgut boundary","RNA-Seq","Homo sapiens","31554966","""cell type: iPSC derived boundary organoid""_""region: Posterior part of micro-dissected organoid""_""culture period: day11 from undifferentiated iPSC""" "Ods001710","GSE121830","GSM3747600","Foregut-midgut boundary","RNA-Seq","Homo sapiens","31554966","""cell type: iPSC derived boundary organoid""_""region: Anterior part of micro-dissected organoid""_""culture period: day8 from undifferentiated iPSC""" "Ods001711","GSE121830","GSM3747601","Foregut-midgut boundary","RNA-Seq","Homo sapiens","31554966","""cell type: iPSC derived boundary organoid""_""region: Posterior part of micro-dissected organoid""_""culture period: day8 from undifferentiated iPSC""" "Ods001712","GSE121830","GSM3747602","Foregut-midgut boundary","RNA-Seq","Homo sapiens","31554966","""cell type: iPSC derived boundary organoid""_""region: Anterior part of micro-dissected organoid""_""culture period: day9 from undifferentiated iPSC""" "Ods001713","GSE121830","GSM3747603","Foregut-midgut boundary","RNA-Seq","Homo sapiens","31554966","""cell type: iPSC derived boundary organoid""_""region: Boundary part of micro-dissected organoid""_""culture period: day9 from undifferentiated iPSC""" "Ods001714","GSE121830","GSM3747604","Foregut-midgut boundary","RNA-Seq","Homo sapiens","31554966","""cell type: iPSC derived boundary organoid""_""region: Posterior part of micro-dissected organoid""_""culture period: day9 from undifferentiated iPSC""" "Ods001715","GSE121830","GSM3747605","Foregut-midgut boundary","RNA-Seq","Homo sapiens","31554966","""cell type: iPSC derived boundary organoid""_""region: Anterior part of micro-dissected organoid""_""culture period: day12 from undifferentiated iPSC""" "Ods001716","GSE121830","GSM3747606","Foregut-midgut boundary","RNA-Seq","Homo sapiens","31554966","""cell type: iPSC derived boundary organoid""_""region: Boundary part of micro-dissected organoid""_""culture period: day12 from undifferentiated iPSC""" "Ods001717","GSE121830","GSM3747607","Foregut-midgut boundary","RNA-Seq","Homo sapiens","31554966","""cell type: iPSC derived boundary organoid""_""region: Posterior part of micro-dissected organoid""_""culture period: day12 from undifferentiated iPSC""" "Ods001718","GSE121830","GSM3747608","Foregut-midgut boundary","RNA-Seq","Homo sapiens","31554966","""cell type: iPSC derived boundary organoid""_""region: Control organoid""_""culture period: day22 from undifferentiated iPSC""" "Ods001720","GSE121830","GSM3747610","Foregut-midgut boundary","RNA-Seq","Homo sapiens","31554966","""cell type: iPSC derived boundary organoid""_""region: Control organoid""_""culture period: day29 from undifferentiated iPSC""" "Ods001736","GSE122729","GSM3484249","Embryoid body","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""tissue: Cultured embryoid body""_""age: 7 days after differentiation""_""genotype: Wild type""" "Ods001737","GSE122729","GSM3484250","Embryoid body","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""tissue: Cultured embryoid body""_""age: 7 days after differentiation""_""genotype: Wild type""" "Ods001738","GSE122729","GSM3484251","Embryoid body","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""tissue: Cultured embryoid body""_""age: 7 days after differentiation""_""genotype: Wild type""" "Ods001739","GSE122729","GSM3484252","Embryoid body","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""tissue: Cultured embryoid body""_""age: 7 days after differentiation""_""genotype: Wild type""" "Ods001740","GSE122729","GSM3484253","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""tissue: Cultured brain organoid""_""age: 30 days after differentiation""_""genotype: Wild type""" "Ods001741","GSE122729","GSM3484254","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""tissue: Cultured brain organoid""_""age: 30 days after differentiation""_""genotype: Wild type""" "Ods001742","GSE122729","GSM3484255","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""tissue: Cultured brain organoid""_""age: 30 days after differentiation""_""genotype: Wild type""" "Ods001743","GSE122729","GSM3484256","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""tissue: Cultured brain organoid""_""age: 30 days after differentiation""_""genotype: Wild type""" "Ods001744","GSE122729","GSM3484257","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""tissue: Cultured brain organoid""_""age: 8 weeks after maturation""_""genotype: Wild type""" "Ods001745","GSE122729","GSM3484258","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""tissue: Cultured brain organoid""_""age: 20 weeks after maturation""_""genotype: Wild type""" "Ods002349","GSE123925","GSM3516941","Small intestine","RNA-Seq","Mus musculus","30599048","""tissue: Small intestinal crypts""_""genotype/variation: wildtype""" "Ods002350","GSE123925","GSM3516942","Small intestine","RNA-Seq","Mus musculus","30599048","""tissue: Small intestinal crypts""_""genotype/variation: wildtype""" "Ods002351","GSE123925","GSM3516943","Small intestine","RNA-Seq","Mus musculus","30599048","""tissue: Small intestinal crypts""_""genotype/variation: wildtype""" "Ods004388","GSE124392","GSM3531609","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 8""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004389","GSE124392","GSM3531610","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 8""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004390","GSE124392","GSM3531611","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 8""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004391","GSE124392","GSM3531612","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 10""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004392","GSE124392","GSM3531613","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 10""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004393","GSE124392","GSM3531614","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 10""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004394","GSE124392","GSM3531615","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 16""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004395","GSE124392","GSM3531616","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 16""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004396","GSE124392","GSM3531617","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 16""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004397","GSE124392","GSM3531618","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 22""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004398","GSE124392","GSM3531619","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 22""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004399","GSE124392","GSM3531620","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 22""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004400","GSE124392","GSM3531621","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 28""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004401","GSE124392","GSM3531622","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 28""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004402","GSE124392","GSM3531623","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 28""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004403","GSE124392","GSM3531624","Kidney","RNA-Seq","Homo sapiens","31265809","""cell line source: H9""_""source cell type: human embryonic stem cells""_""differentiation day: Day 28""_""cell line of origin: H9 human embryonic stem cell""_""genotype/variation: MAFB-P2A-eGFP""" "Ods004422","GSE124569","GSM3526402","Retina","RNA-Seq","Homo sapiens","30842553","""age at dissection (day): D20""_""days in vitro: 0""_""tissue origin: H9-derived retinal organoids""_""karyotype: WT""_""tissue: retina""" "Ods004423","GSE124569","GSM3526405","Retina","RNA-Seq","Homo sapiens","30842553","""age at dissection (day): D30""_""days in vitro: 0""_""tissue origin: H9-derived retinal organoids""_""karyotype: WT""_""tissue: retina""" "Ods004424","GSE124569","GSM3526407","Retina","RNA-Seq","Homo sapiens","30842553","""age at dissection (day): D40""_""days in vitro: 0""_""tissue origin: H9-derived retinal organoids""_""karyotype: WT""_""tissue: retina""" "Ods004425","GSE124569","GSM3526409","Retina","RNA-Seq","Homo sapiens","30842553","""age at dissection (day): D63""_""days in vitro: 0""_""tissue origin: H9-derived retinal organoids""_""karyotype: WT""_""tissue: retina""" "Ods004426","GSE124569","GSM3526410","Retina","RNA-Seq","Homo sapiens","30842553","""age at dissection (day): D92""_""days in vitro: 0""_""tissue origin: H9-derived retinal organoids""_""karyotype: WT""_""tissue: retina""" "Ods004570","GSE127556","GSM3636069","Small intestine","RNA-Seq","Mus musculus","32160911","""genotype/variation: wild type""_""strain: C57BL/6""_""cell type: organoid culture""" "Ods004571","GSE127556","GSM3636070","Small intestine","RNA-Seq","Mus musculus","32160911","""genotype/variation: wild type""_""strain: C57BL/6""_""cell type: organoid culture""" "Ods004572","GSE127556","GSM3636071","Small intestine","RNA-Seq","Mus musculus","32160911","""genotype/variation: wild type""_""strain: C57BL/6""_""cell type: organoid culture""" "Ods004743","GSE128667","GSM3682013","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 0""_""genotype: empty vehicle""" "Ods004744","GSE128667","GSM3682014","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 0""_""genotype: empty vehicle""" "Ods004745","GSE128667","GSM3682015","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 0""_""genotype: empty vehicle""" "Ods004746","GSE128667","GSM3682016","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 0""_""genotype: wild type""" "Ods004747","GSE128667","GSM3682017","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 0""_""genotype: wild type""" "Ods004748","GSE128667","GSM3682018","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 0""_""genotype: wild type""" "Ods004755","GSE128667","GSM3682025","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 1""_""genotype: empty vehicle""" "Ods004756","GSE128667","GSM3682026","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 1""_""genotype: empty vehicle""" "Ods004757","GSE128667","GSM3682027","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 1""_""genotype: empty vehicle""" "Ods004758","GSE128667","GSM3682028","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 1""_""genotype: wild type""" "Ods004759","GSE128667","GSM3682029","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 1""_""genotype: wild type""" "Ods004760","GSE128667","GSM3682030","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 1""_""genotype: wild type""" "Ods004767","GSE128667","GSM3682037","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 11""_""genotype: empty vehicle""" "Ods004768","GSE128667","GSM3682038","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 11""_""genotype: empty vehicle""" "Ods004769","GSE128667","GSM3682039","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 11""_""genotype: empty vehicle""" "Ods004770","GSE128667","GSM3682040","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 11""_""genotype: wild type""" "Ods004771","GSE128667","GSM3682041","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 11""_""genotype: wild type""" "Ods004772","GSE128667","GSM3682042","Prostate","RNA-Seq","Mus musculus","31243370","""time point: Day 11""_""genotype: wild type""" "Ods004779","GSE128717","GSM3683649","Liver","RNA-Seq","Homo sapiens",NA,"""tissue: human adult liver tissue""_""cell type: human adult hepatic organoids""_""passage: 1""" "Ods004780","GSE128717","GSM3683650","Liver","RNA-Seq","Homo sapiens",NA,"""tissue: human adult liver tissue""_""cell type: human adult hepatic organoids""_""passage: 1""" "Ods004817","GSE129104","GSM3693288","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D37""" "Ods004818","GSE129104","GSM3693289","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D37""" "Ods004819","GSE129104","GSM3693290","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D67""" "Ods004820","GSE129104","GSM3693291","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D67""" "Ods004821","GSE129104","GSM3693292","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D67""" "Ods004822","GSE129104","GSM3693293","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D90""" "Ods004823","GSE129104","GSM3693294","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D90""" "Ods004824","GSE129104","GSM3693295","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D120""" "Ods004825","GSE129104","GSM3693296","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D120""" "Ods004826","GSE129104","GSM3693297","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D150""" "Ods004827","GSE129104","GSM3693298","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D150""" "Ods004828","GSE129104","GSM3693299","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D200""" "Ods004829","GSE129104","GSM3693300","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D200""" "Ods004830","GSE129104","GSM3693301","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D37""" "Ods004831","GSE129104","GSM3693302","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D37""" "Ods004832","GSE129104","GSM3693303","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D37""" "Ods004833","GSE129104","GSM3693304","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D60""" "Ods004834","GSE129104","GSM3693305","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D60""" "Ods004835","GSE129104","GSM3693306","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D67""" "Ods004836","GSE129104","GSM3693307","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D75""" "Ods004837","GSE129104","GSM3693308","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D75""" "Ods004838","GSE129104","GSM3693309","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D90""" "Ods004839","GSE129104","GSM3693310","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D90""" "Ods004840","GSE129104","GSM3693311","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D105""" "Ods004841","GSE129104","GSM3693312","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D105""" "Ods004842","GSE129104","GSM3693313","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D120""" "Ods004843","GSE129104","GSM3693314","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D120""" "Ods004844","GSE129104","GSM3693315","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D150""" "Ods004845","GSE129104","GSM3693316","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D150""" "Ods004846","GSE129104","GSM3693317","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D200""" "Ods004847","GSE129104","GSM3693318","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: 9CRAL""_""differentiation day: D200""" "Ods004848","GSE129104","GSM3693319","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D25""" "Ods004849","GSE129104","GSM3693320","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D25""" "Ods004850","GSE129104","GSM3693321","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D25""" "Ods004851","GSE129104","GSM3693322","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D25""" "Ods004852","GSE129104","GSM3693323","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D25""" "Ods004853","GSE129104","GSM3693324","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D25""" "Ods004854","GSE129104","GSM3693325","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D25""" "Ods004855","GSE129104","GSM3693326","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D60""" "Ods004856","GSE129104","GSM3693327","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D60""" "Ods004857","GSE129104","GSM3693328","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D60""" "Ods004858","GSE129104","GSM3693329","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D88""" "Ods004859","GSE129104","GSM3693330","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D88""" "Ods004860","GSE129104","GSM3693331","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D88""" "Ods004861","GSE129104","GSM3693332","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D123""" "Ods004862","GSE129104","GSM3693333","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D123""" "Ods004863","GSE129104","GSM3693334","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D123""" "Ods004864","GSE129104","GSM3693335","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D123""" "Ods004865","GSE129104","GSM3693336","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D123""" "Ods004866","GSE129104","GSM3693337","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D172""" "Ods004867","GSE129104","GSM3693338","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D172""" "Ods004868","GSE129104","GSM3693339","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D172""" "Ods004869","GSE129104","GSM3693340","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D186""" "Ods004870","GSE129104","GSM3693341","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D186""" "Ods004871","GSE129104","GSM3693342","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: ESP""_""retinoic acid: ATRA""_""differentiation day: D186""" "Ods004872","GSE129104","GSM3693343","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D38""" "Ods004873","GSE129104","GSM3693344","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D38""" "Ods004874","GSE129104","GSM3693345","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D90""" "Ods004875","GSE129104","GSM3693346","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D90""" "Ods004876","GSE129104","GSM3693347","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D90""" "Ods004877","GSE129104","GSM3693348","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D90""" "Ods004878","GSE129104","GSM3693349","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D90""" "Ods004879","GSE129104","GSM3693350","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D90""" "Ods004880","GSE129104","GSM3693351","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D120""" "Ods004881","GSE129104","GSM3693352","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D120""" "Ods004882","GSE129104","GSM3693353","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D120""" "Ods004883","GSE129104","GSM3693354","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D145""" "Ods004884","GSE129104","GSM3693355","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D153""" "Ods004885","GSE129104","GSM3693356","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D200""" "Ods004886","GSE129104","GSM3693357","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D202""" "Ods004887","GSE129104","GSM3693358","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: NEI377""_""retinoic acid: ATRA""_""differentiation day: D203""" "Ods004888","GSE129104","GSM3693359","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: ATRA""_""differentiation day: D38""" "Ods004889","GSE129104","GSM3693360","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: ATRA""_""differentiation day: D91""" "Ods004890","GSE129104","GSM3693361","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: ATRA""_""differentiation day: D91""" "Ods004891","GSE129104","GSM3693362","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: ATRA""_""differentiation day: D122""" "Ods004892","GSE129104","GSM3693363","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: ATRA""_""differentiation day: D152""" "Ods004893","GSE129104","GSM3693364","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: ATRA""_""differentiation day: D152""" "Ods004894","GSE129104","GSM3693365","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: ATRA""_""differentiation day: D200""" "Ods004895","GSE129104","GSM3693366","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: ATRA""_""differentiation day: D201""" "Ods004896","GSE129104","GSM3693367","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: iPSC""_""cell line: PEN8E""_""retinoic acid: ATRA""_""differentiation day: D201""" "Ods004897","GSE129104","GSM3693368","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: ATRA""_""differentiation day: D90""" "Ods004898","GSE129104","GSM3693369","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: ATRA""_""differentiation day: D90""" "Ods004899","GSE129104","GSM3693370","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: ATRA""_""differentiation day: D120""" "Ods004900","GSE129104","GSM3693371","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: ATRA""_""differentiation day: D120""" "Ods004901","GSE129104","GSM3693372","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: ATRA""_""differentiation day: D120""" "Ods004902","GSE129104","GSM3693373","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D90""" "Ods004903","GSE129104","GSM3693374","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D90""" "Ods004904","GSE129104","GSM3693375","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D120""" "Ods004905","GSE129104","GSM3693376","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D120""" "Ods004906","GSE129104","GSM3693377","Retina","RNA-Seq","Homo sapiens","31814692","""stem cells type: ESC""_""cell line: H9""_""retinoic acid: 9CRAL""_""differentiation day: D120""" "Ods004968","GSE129457","GSM3713194","Intrahepatic bile duct","RNA-Seq","Homo sapiens","31130514","""genotype: WT""_""tissue: liver ductal organoids""_""donor id: human donor Donor1-D19""" "Ods004969","GSE129457","GSM3713195","Intrahepatic bile duct","RNA-Seq","Homo sapiens","31130514","""genotype: WT""_""tissue: liver ductal organoids""_""donor id: human donor Donor2-D13""" "Ods004970","GSE129457","GSM3713196","Intrahepatic bile duct","RNA-Seq","Homo sapiens","31130514","""genotype: WT""_""tissue: liver ductal organoids""_""donor id: human donor Donor3-D17""" "Ods004997","GSE130075","GSM3731527","Liver","scRNA-Seq","Homo sapiens","31155493","""cell type: iPSC derived human liver organoids""_""cultured day: day33""" "Ods005006","GSE130318","GSM3735994","Prostate","scRNA-Seq","Homo sapiens","31317052","""cell type: Primary Epithelial Cells""_""tissue: Prostate""_""culture condition: Matrigel""" "Ods005009","GSE130649","GSM3746280","Inner ear","scRNA-Seq","Mus musculus","31204303","""cell type: Inner ear organoid""_""developmental stage: Day 35""_""derived strain: 129X1x129S1""_""genotype/variation: Wild-Type_R1/E""" "Ods005050","GSE131380","GSM3772927","Prostate","RNA-Seq","Homo sapiens","32170918","""cell type: Pro Organoid Week 12""" "Ods005051","GSE131380","GSM3772928","Prostate","RNA-Seq","Homo sapiens","32170918","""cell type: Basal""" "Ods005052","GSE131380","GSM3772929","Prostate","RNA-Seq","Homo sapiens","32170918","""cell type: Basal""" "Ods005053","GSE131380","GSM3772930","Prostate","RNA-Seq","Homo sapiens","32170918","""cell type: Luminal""" "Ods005054","GSE131380","GSM3772931","Prostate","RNA-Seq","Homo sapiens","32170918","""cell type: Luminal""" "Ods005106","GSE131845","GSM3822129","Prostate","RNA-Seq","Mus musculus","32024754","""tissue: prostate""_""type: organoids""_""mouse line: CMV-Cre-ERT2, Tip5 lox/lox, ROSA26-mTmg-Tg+ (inducible Tip5-KO)""_""treatment: lentiviral transduction with shRNA-control""_""genotype: WT""" "Ods005107","GSE131845","GSM3822130","Prostate","RNA-Seq","Mus musculus","32024754","""tissue: prostate""_""type: organoids""_""mouse line: CMV-Cre-ERT2, Tip5 lox/lox, ROSA26-mTmg-Tg+ (inducible Tip5-KO)""_""treatment: lentiviral transduction with shRNA-control""_""genotype: WT""" "Ods005112","GSE131845","GSM3822135","Prostate","RNA-Seq","Mus musculus","32024754","""tissue: prostate""_""type: organoids""_""mouse line: CMV-Cre-ERT2, Tip5 lox/lox, ROSA26-mTmg-Tg+ (inducible Tip5-KO)""_""treatment: lentiviral transduction with shRNA-control""_""genotype: WT""" "Ods005113","GSE131845","GSM3822136","Prostate","RNA-Seq","Mus musculus","32024754","""tissue: prostate""_""type: organoids""_""mouse line: CMV-Cre-ERT2, Tip5 lox/lox, ROSA26-mTmg-Tg+ (inducible Tip5-KO)""_""treatment: lentiviral transduction with shRNA-control""_""genotype: WT""" "Ods005120","GSE131877","GSM3823876","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-1""_""d.e. group name: ESP1_D25""_""time point: Day 25""" "Ods005121","GSE131877","GSM3823877","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-1""_""d.e. group name: ESP1_D25""_""time point: Day 25""" "Ods005122","GSE131877","GSM3823878","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-1""_""d.e. group name: ESP1_D25""_""time point: Day 25""" "Ods005123","GSE131877","GSM3823879","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-1""_""d.e. group name: ESP1_D25""_""time point: Day 25""" "Ods005124","GSE131877","GSM3823880","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-1""_""d.e. group name: ESP1_D25""_""time point: Day 25""" "Ods005125","GSE131877","GSM3823881","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-2""_""d.e. group name: ESP1_D25""_""time point: Day 25""" "Ods005126","GSE131877","GSM3823882","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-2""_""d.e. group name: ESP1_D25""_""time point: Day 25""" "Ods005127","GSE131877","GSM3823883","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-1""_""d.e. group name: ESP1_D60""_""time point: Day 60""" "Ods005128","GSE131877","GSM3823884","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-1""_""d.e. group name: ESP1_D60""_""time point: Day 60""" "Ods005129","GSE131877","GSM3823885","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-2""_""d.e. group name: ESP1_D60""_""time point: Day 60""" "Ods005130","GSE131877","GSM3823886","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-1""_""d.e. group name: ESP1_D88""_""time point: Day 88""" "Ods005131","GSE131877","GSM3823887","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-1""_""d.e. group name: ESP1_D88""_""time point: Day 88""" "Ods005132","GSE131877","GSM3823888","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-2""_""d.e. group name: ESP1_D88""_""time point: Day 88""" "Ods005133","GSE131877","GSM3823889","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-1""_""d.e. group name: ESP1_D123""_""time point: Day 123""" "Ods005134","GSE131877","GSM3823890","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-1""_""d.e. group name: ESP1_D123""_""time point: Day 123""" "Ods005135","GSE131877","GSM3823891","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-1""_""d.e. group name: ESP1_D123""_""time point: Day 123""" "Ods005136","GSE131877","GSM3823892","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-1""_""d.e. group name: ESP1_D123""_""time point: Day 123""" "Ods005137","GSE131877","GSM3823893","Retina","RNA-Seq","Homo sapiens",NA,"""individual: Control-1""_""d.e. group name: ESP1_D123""_""time point: Day 123""" "Ods005150","GSE131909","GSM3827175","Urothelium","scRNA-Seq","Mus musculus","31562298","""strain: C57BL/6""_""genotype: WT""_""age: 8-10 week-old mice""_""tissue: Normal Mouse Urothelium organoids""_""differentiation stage: Proliferative (NMU-O-P)""" "Ods005152","GSE132026","GSM3822053","Kidney","RNA-Seq","Homo sapiens","31303547","""cell type: Human pluripotent stem cells""_""tissue: Kidney organoid""_""developmental stage: Day0""" "Ods005153","GSE132026","GSM3822054","Kidney","RNA-Seq","Homo sapiens","31303547","""cell type: Human pluripotent stem cells""_""tissue: Kidney organoid""_""developmental stage: Day0""" "Ods005154","GSE132026","GSM3822055","Kidney","RNA-Seq","Homo sapiens","31303547","""cell type: Human pluripotent stem cells""_""tissue: Kidney organoid""_""developmental stage: Day10""" "Ods005155","GSE132026","GSM3822056","Kidney","RNA-Seq","Homo sapiens","31303547","""cell type: Human pluripotent stem cells""_""tissue: Kidney organoid""_""developmental stage: Day10""" "Ods005156","GSE132026","GSM3822057","Kidney","RNA-Seq","Homo sapiens","31303547","""cell type: Human pluripotent stem cells""_""tissue: Kidney organoid""_""developmental stage: Day24""" "Ods005157","GSE132026","GSM3822058","Kidney","RNA-Seq","Homo sapiens","31303547","""cell type: Human pluripotent stem cells""_""tissue: Kidney organoid""_""developmental stage: Day24""" "Ods005285","GSE133092","GSM3899749","Colon","RNA-Seq","Mus musculus",NA,"""strain background: C57BL/6""_""genotype/variation: WT""_""tissue: Colon""_""cell type: Orgnaoids""_""culture condition: WENR medium""" "Ods005286","GSE133092","GSM3899750","Colon","RNA-Seq","Mus musculus",NA,"""strain background: C57BL/6""_""genotype/variation: WT""_""tissue: Colon""_""cell type: Orgnaoids""_""culture condition: WENR medium""" "Ods005287","GSE133092","GSM3899751","Colon","RNA-Seq","Mus musculus",NA,"""strain background: C57BL/6""_""genotype/variation: WT""_""tissue: Colon""_""cell type: Orgnaoids""_""culture condition: WENR medium""" "Ods005288","GSE133092","GSM3899752","Colon","RNA-Seq","Mus musculus",NA,"""strain background: C57BL/6""_""genotype/variation: WT""_""tissue: Colon""_""cell type: Orgnaoids""_""culture condition: ENR medium""" "Ods005289","GSE133092","GSM3899753","Colon","RNA-Seq","Mus musculus",NA,"""strain background: C57BL/6""_""genotype/variation: WT""_""tissue: Colon""_""cell type: Orgnaoids""_""culture condition: ENR medium""" "Ods005290","GSE133092","GSM3899754","Colon","RNA-Seq","Mus musculus",NA,"""strain background: C57BL/6""_""genotype/variation: WT""_""tissue: Colon""_""cell type: Orgnaoids""_""culture condition: ENR medium""" "Ods005291","GSE133534","GSM3911413","Brain","RNA-Seq","Homo sapiens","32186681","""disease state: control""_""cell type: Human iPSC derived cerebral organoids""_""age: 6 months of differentiation""" "Ods005292","GSE133534","GSM3911414","Brain","RNA-Seq","Homo sapiens","32186681","""disease state: control""_""cell type: Human iPSC derived cerebral organoids""_""age: 6 months of differentiation""" "Ods005293","GSE133534","GSM3911415","Brain","RNA-Seq","Homo sapiens","32186681","""disease state: control""_""cell type: Human iPSC derived cerebral organoids""_""age: 6 months of differentiation""" "Ods005294","GSE133534","GSM3911416","Brain","RNA-Seq","Homo sapiens","32186681","""disease state: control""_""cell type: Human iPSC derived cerebral organoids""_""age: 6 months of differentiation""" "Ods005295","GSE133534","GSM3911417","Brain","RNA-Seq","Homo sapiens","32186681","""disease state: control""_""cell type: Human iPSC derived cerebral organoids""_""age: 6 months of differentiation""" "Ods005296","GSE133534","GSM3911418","Brain","RNA-Seq","Homo sapiens","32186681","""disease state: control""_""cell type: Human iPSC derived cerebral organoids""_""age: 6 months of differentiation""" "Ods005297","GSE133534","GSM3911419","Brain","RNA-Seq","Homo sapiens","32186681","""disease state: control""_""cell type: Human iPSC derived cerebral organoids""_""age: 6 months of differentiation""" "Ods005298","GSE133534","GSM3911420","Brain","RNA-Seq","Homo sapiens","32186681","""disease state: control""_""cell type: Human iPSC derived cerebral organoids""_""age: 6 months of differentiation""" "Ods005299","GSE133534","GSM3911421","Brain","RNA-Seq","Homo sapiens","32186681","""disease state: control""_""cell type: Human iPSC derived cerebral organoids""_""age: 6 months of differentiation""" "Ods005300","GSE133534","GSM3911422","Brain","RNA-Seq","Homo sapiens","32186681","""disease state: control""_""cell type: Human iPSC derived cerebral organoids""_""age: 6 months of differentiation""" "Ods005301","GSE133534","GSM3911423","Brain","RNA-Seq","Homo sapiens","32186681","""disease state: control""_""cell type: Human iPSC derived cerebral organoids""_""age: 6 months of differentiation""" "Ods005370","GSE134497","GSM3954324","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: healthy control""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005371","GSE134497","GSM3954325","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: healthy control""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005372","GSE134497","GSM3954326","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: healthy control""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005373","GSE134497","GSM3954327","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: healthy control""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005374","GSE134497","GSM3954328","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: healthy control""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005375","GSE134497","GSM3954329","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: healthy control""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005376","GSE134497","GSM3954330","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: healthy control""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005377","GSE134497","GSM3954331","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: healthy control""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005378","GSE134497","GSM3954332","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: healthy control""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005379","GSE134497","GSM3954333","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: healthy control""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005380","GSE134497","GSM3954334","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: healthy control""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005381","GSE134497","GSM3954335","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: schizophrenia (SCZ)""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005382","GSE134497","GSM3954336","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: schizophrenia (SCZ)""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005383","GSE134497","GSM3954337","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: schizophrenia (SCZ)""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005384","GSE134497","GSM3954338","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: schizophrenia (SCZ)""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005385","GSE134497","GSM3954339","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: schizophrenia (SCZ)""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005386","GSE134497","GSM3954340","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: schizophrenia (SCZ)""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005387","GSE134497","GSM3954341","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: schizophrenia (SCZ)""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005388","GSE134497","GSM3954342","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: schizophrenia (SCZ)""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005389","GSE134497","GSM3954343","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: schizophrenia (SCZ)""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005390","GSE134497","GSM3954344","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: schizophrenia (SCZ)""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005391","GSE134497","GSM3954345","Brain","RNA-Seq","Homo sapiens","32306996","""diagnosis: schizophrenia (SCZ)""_""cell type: Human iPSC derived cerebral organoids""_""state: 6 months of differention""" "Ods005407","GSE135196","GSM3993365","Duodenum","RNA-Seq","Homo sapiens","31933478","""cell type: Duodenal Epithelial Cells""_""donor: Donor 1""_""timepoint: Day 8""_""applied mechanostimulation: none""" "Ods005408","GSE135196","GSM3993366","Duodenum","RNA-Seq","Homo sapiens","31933478","""cell type: Duodenal Epithelial Cells""_""donor: Donor 2""_""timepoint: Day 8""_""applied mechanostimulation: none""" "Ods005409","GSE135196","GSM3993367","Duodenum","RNA-Seq","Homo sapiens","31933478","""cell type: Duodenal Epithelial Cells""_""donor: Donor 3""_""timepoint: Day 8""_""applied mechanostimulation: none""" "Ods005410","GSE135362","GSM4477824","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 1 100 ng/ml Rspo""_""""" "Ods005411","GSE135362","GSM4477825","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 1 5 ng/ml Rspo""_""""" "Ods005412","GSE135362","GSM4477826","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 2 100 ng/ml Rspo""_""""" "Ods005413","GSE135362","GSM4477827","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 2 5 ng/ml Rspo""_""""" "Ods005414","GSE135362","GSM4477828","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 3 100 ng/ml Rspo""_""""" "Ods005415","GSE135362","GSM4477829","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 3 5 ng/ml Rspo""_""""" "Ods005416","GSE135362","GSM4477830","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 1 100 ng/ml Rspo""_""""" "Ods005417","GSE135362","GSM4477831","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 1 5 ng/ml Rspo""_""""" "Ods005418","GSE135362","GSM4477832","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 2 100 ng/ml Rspo""_""""" "Ods005419","GSE135362","GSM4477833","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 2 5 ng/ml Rspo""_""""" "Ods005420","GSE135362","GSM4477834","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 3 100 ng/ml Rspo""_""""" "Ods005421","GSE135362","GSM4477835","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 3 5 ng/ml Rspo""_""""" "Ods005422","GSE135362","GSM4477836","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 1 100 ng/ml Rspo""_""""" "Ods005423","GSE135362","GSM4477837","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 1 5 ng/ml Rspo""_""""" "Ods005424","GSE135362","GSM4477838","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 2 100 ng/ml Rspo""_""""" "Ods005425","GSE135362","GSM4477839","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 2 5 ng/ml Rspo""_""""" "Ods005426","GSE135362","GSM4477840","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 3 100 ng/ml Rspo""_""""" "Ods005427","GSE135362","GSM4477841","Fetal small intestine","RNA-Seq","Mus musculus","32468660","""tissue: small intestine""_""developmental stage: E17.5""_""cell type: Organoid""_""genotype: Lgr5 wild-type""_""treatment: cultured in mouse Rspondin 3 5 ng/ml Rspo""_""""" "Ods005473","GSE136379","GSM4047702","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D26""_""supplement: BSA""" "Ods005474","GSE136379","GSM4047703","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D26""_""supplement: BSA""" "Ods005475","GSE136379","GSM4047704","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D26""_""supplement: LA""" "Ods005476","GSE136379","GSM4047705","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D26""_""supplement: LA""" "Ods005477","GSE136379","GSM4047706","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D26""_""supplement: DHA""" "Ods005478","GSE136379","GSM4047707","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D26""_""supplement: DHA""" "Ods005479","GSE136379","GSM4047708","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: BSA""" "Ods005480","GSE136379","GSM4047709","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: BSA""" "Ods005481","GSE136379","GSM4047710","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: BSA""" "Ods005482","GSE136379","GSM4047711","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: LA""" "Ods005483","GSE136379","GSM4047712","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: LA""" "Ods005484","GSE136379","GSM4047713","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: LA""" "Ods005485","GSE136379","GSM4047714","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: DHA""" "Ods005486","GSE136379","GSM4047715","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: DHA""" "Ods005487","GSE136379","GSM4047716","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: DHA""" "Ods005488","GSE136379","GSM4047717","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: BSA+FGF1""" "Ods005489","GSE136379","GSM4047718","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: BSA+FGF1""" "Ods005490","GSE136379","GSM4047719","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: BSA+FGF1""" "Ods005491","GSE136379","GSM4047720","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: LA+FGF1""" "Ods005492","GSE136379","GSM4047721","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: LA+FGF1""" "Ods005493","GSE136379","GSM4047722","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: LA+FGF1""" "Ods005494","GSE136379","GSM4047723","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: DHA+FGF1""" "Ods005495","GSE136379","GSM4047724","Retina","RNA-Seq","Mus musculus","31631019","""cell type: iPSC derived Retina organoids""_""time point: D32""_""supplement: DHA+FGF1""" "Ods005496","GSE136795","GSM4058169","Uterine gland","RNA-Seq","Homo sapiens","31666317","""treatment: Control""_""days of culture: 12""_""patient id: Patient H8""" "Ods005497","GSE136795","GSM4058170","Uterine gland","RNA-Seq","Homo sapiens","31666317","""treatment: Control""_""days of culture: 6""_""patient id: Patient H7""" "Ods005498","GSE136795","GSM4058171","Uterine gland","RNA-Seq","Homo sapiens","31666317","""treatment: Control""_""days of culture: 12""_""patient id: Patient H8""" "Ods005504","GSE136795","GSM4058177","Uterine gland","RNA-Seq","Homo sapiens","31666317","""treatment: Control""_""days of culture: 12""_""patient id: Patient H8""" "Ods005505","GSE136795","GSM4058178","Uterine gland","RNA-Seq","Homo sapiens","31666317","""treatment: Control""_""days of culture: 6""_""patient id: Patient H7""" "Ods005506","GSE136795","GSM4058179","Uterine gland","RNA-Seq","Homo sapiens","31666317","""treatment: Control""_""days of culture: 12""_""patient id: Patient H8""" "Ods005512","GSE136795","GSM4058185","Uterine gland","RNA-Seq","Homo sapiens","31666317","""treatment: Control""_""days of culture: 12""_""patient id: Patient H8""" "Ods005513","GSE136795","GSM4058186","Uterine gland","RNA-Seq","Homo sapiens","31666317","""treatment: Control""_""days of culture: 6""_""patient id: Patient H7""" "Ods005514","GSE136795","GSM4058187","Uterine gland","RNA-Seq","Homo sapiens","31666317","""treatment: Control""_""days of culture: 12""_""patient id: Patient H8""" "Ods005532","GSE136929","GSM5468100","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 0""_""genotype: WT hESCs""" "Ods005533","GSE136929","GSM5468101","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 0""_""genotype: WT hESCs""" "Ods005542","GSE136929","GSM5468110","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 30""_""genotype: WT hESCs""" "Ods005543","GSE136929","GSM5468111","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 30""_""genotype: WT hESCs""" "Ods005544","GSE136929","GSM5468112","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 30""_""genotype: WT hESCs""" "Ods005548","GSE136929","GSM5468116","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 45""_""genotype: WT hESCs""" "Ods005549","GSE136929","GSM5468117","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 45""_""genotype: WT hESCs""" "Ods005550","GSE136929","GSM5468118","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 45""_""genotype: WT hESCs""" "Ods005554","GSE136929","GSM5468122","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 60""_""genotype: WT hESCs""" "Ods005555","GSE136929","GSM5468123","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 60""_""genotype: WT hESCs""" "Ods005556","GSE136929","GSM5468124","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 60""_""genotype: WT hESCs""" "Ods005565","GSE136929","GSM5468133","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 75""_""genotype: WT hESCs""" "Ods005566","GSE136929","GSM5468134","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 75""_""genotype: WT hESCs""" "Ods005567","GSE136929","GSM5468135","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 75""_""genotype: WT hESCs""" "Ods005576","GSE136929","GSM5468144","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 90""_""genotype: WT hESCs""" "Ods005577","GSE136929","GSM5468145","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 90""_""genotype: WT hESCs""" "Ods005578","GSE136929","GSM5468146","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 90""_""genotype: WT hESCs""" "Ods005590","GSE136929","GSM5468158","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 105""_""genotype: WT hESCs""" "Ods005591","GSE136929","GSM5468159","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 105""_""genotype: WT hESCs""" "Ods005604","GSE136929","GSM5468172","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 120""_""genotype: WT hESCs""" "Ods005605","GSE136929","GSM5468173","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 120""_""genotype: WT hESCs""" "Ods005606","GSE136929","GSM5468174","Retina","RNA-Seq","Homo sapiens","33318192","""organoids: human ES-derived retinal organoids""_""developmental/tumor stage: day 120""_""genotype: WT hESCs""" "Ods005666","GSE138145","GSM4100932","Pancreatic duct","RNA-Seq","Mus musculus","32826305","""strain: mixed 129/B6""_""hnf4a status: Positive""_""agent: Control condition""" "Ods005668","GSE138145","GSM4100934","Pancreatic duct","RNA-Seq","Mus musculus","32826305","""strain: mixed 129/B6""_""hnf4a status: Positive""_""agent: Control condition""" "Ods005670","GSE138145","GSM4100936","Pancreatic duct","RNA-Seq","Mus musculus","32826305","""strain: mixed 129/B6""_""hnf4a status: Positive""_""agent: Control condition""" "Ods005672","GSE138145","GSM4100938","Pancreatic duct","RNA-Seq","Mus musculus","32826305","""strain: mixed 129/B6""_""hnf4a status: Positive""_""agent: Control condition""" "Ods005681","GSE138611","GSM4114230","Intrahepatic bile duct","RNA-Seq","Homo sapiens","31827102","""tissue: liver ductal organoids""_""growth: grown in ECM""" "Ods005682","GSE138611","GSM4114231","Intrahepatic bile duct","RNA-Seq","Homo sapiens","31827102","""tissue: liver ductal organoids""_""growth: grown in ECM""" "Ods005683","GSE138611","GSM4114232","Intrahepatic bile duct","RNA-Seq","Homo sapiens","31827102","""tissue: liver ductal organoids""_""growth: grown in ECM""" "Ods005684","GSE138611","GSM4114233","Intrahepatic bile duct","RNA-Seq","Homo sapiens","31827102","""tissue: liver ductal organoids""_""growth: grown in ECM""" "Ods005685","GSE138611","GSM4114234","Intrahepatic bile duct","RNA-Seq","Homo sapiens","31827102","""tissue: liver ductal organoids""_""growth: grown in BME""" "Ods005686","GSE138611","GSM4114235","Intrahepatic bile duct","RNA-Seq","Homo sapiens","31827102","""tissue: liver ductal organoids""_""growth: grown in BME""" "Ods005687","GSE138611","GSM4114236","Intrahepatic bile duct","RNA-Seq","Homo sapiens","31827102","""tissue: liver ductal organoids""_""growth: grown in BME""" "Ods005688","GSE138611","GSM4114237","Intrahepatic bile duct","RNA-Seq","Homo sapiens","31827102","""tissue: liver ductal organoids""_""growth: grown in BME""" "Ods005689","GSE138611","GSM4114238","Liver","RNA-Seq","Homo sapiens","31827102","""tissue: hepatocyte organoids""_""growth: grown in ECM""" "Ods005690","GSE138611","GSM4114239","Liver","RNA-Seq","Homo sapiens","31827102","""tissue: hepatocyte organoids""_""growth: grown in ECM""" "Ods005691","GSE138611","GSM4114240","Liver","RNA-Seq","Homo sapiens","31827102","""tissue: hepatocyte organoids""_""growth: grown in ECM""" "Ods005692","GSE138611","GSM4114241","Liver","RNA-Seq","Homo sapiens","31827102","""tissue: hepatocyte organoids""_""growth: grown in ECM""" "Ods005693","GSE138611","GSM4114242","Liver","RNA-Seq","Homo sapiens","31827102","""tissue: hepatocyte organoids""_""growth: grown in ECM""" "Ods005694","GSE138611","GSM4114243","Liver","RNA-Seq","Homo sapiens","31827102","""tissue: hepatocyte organoids""_""growth: grown in ECM""" "Ods005695","GSE138611","GSM4114244","Liver","RNA-Seq","Homo sapiens","31827102","""tissue: hepatocyte organoids""_""growth: grown in BME""" "Ods005696","GSE138611","GSM4114245","Liver","RNA-Seq","Homo sapiens","31827102","""tissue: hepatocyte organoids""_""growth: grown in BME""" "Ods005697","GSE138611","GSM4114246","Liver","RNA-Seq","Homo sapiens","31827102","""tissue: hepatocyte organoids""_""growth: grown in BME""" "Ods005698","GSE138611","GSM4114247","Liver","RNA-Seq","Homo sapiens","31827102","""tissue: hepatocyte organoids""_""growth: grown in BME""" "Ods005699","GSE138611","GSM4114248","Liver","RNA-Seq","Homo sapiens","31827102","""tissue: hepatocyte organoids""_""growth: grown in BME""" "Ods005700","GSE138611","GSM4114249","Liver","RNA-Seq","Homo sapiens","31827102","""tissue: hepatocyte organoids""_""growth: grown in BME""" "Ods006168","GSE140458","GSM4162158","Intestine","RNA-Seq","Homo sapiens","32390556","""tissue: Primary human intestinal organoids""" "Ods006169","GSE140458","GSM4162159","Intestine","RNA-Seq","Homo sapiens","32390556","""tissue: Primary human intestinal organoids""" "Ods006170","GSE140458","GSM4162160","Intestine","RNA-Seq","Homo sapiens","32390556","""tissue: Primary human intestinal organoids""" "Ods006189","GSE140843","GSM4188826","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: Human iPSC derieved cerebral organoids""_""age: 6 months of differentiation""_""diagnosis: healthy control""" "Ods006190","GSE140843","GSM4188827","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: Human iPSC derieved cerebral organoids""_""age: 6 months of differentiation""_""diagnosis: healthy control""" "Ods006191","GSE140843","GSM4188828","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: Human iPSC derieved cerebral organoids""_""age: 6 months of differentiation""_""diagnosis: healthy control""" "Ods006192","GSE140843","GSM4188829","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: Human iPSC derieved cerebral organoids""_""age: 6 months of differentiation""_""diagnosis: healthy control""" "Ods006193","GSE140843","GSM4188830","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: Human iPSC derieved cerebral organoids""_""age: 6 months of differentiation""_""diagnosis: healthy control""" "Ods006194","GSE140843","GSM4188831","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: Human iPSC derieved cerebral organoids""_""age: 6 months of differentiation""_""diagnosis: healthy control""" "Ods006195","GSE140843","GSM4188832","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: Human iPSC derieved cerebral organoids""_""age: 6 months of differentiation""_""diagnosis: healthy control""" "Ods006196","GSE140843","GSM4188833","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: Human iPSC derieved cerebral organoids""_""age: 6 months of differentiation""_""diagnosis: healthy control""" "Ods006197","GSE140843","GSM4188834","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: Human iPSC derieved cerebral organoids""_""age: 6 months of differentiation""_""diagnosis: healthy control""" "Ods006198","GSE140843","GSM4188835","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: Human iPSC derieved cerebral organoids""_""age: 6 months of differentiation""_""diagnosis: healthy control""" "Ods006199","GSE140843","GSM4188836","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: Human iPSC derieved cerebral organoids""_""age: 6 months of differentiation""_""diagnosis: healthy control""" "Ods006200","GSE140888","GSM4189694","Small intestine","RNA-Seq","Mus musculus",NA,"""tag: C57BL/6""_""tissue: small intestinal organoids""_""treatment: Day 3, no stimulation""" "Ods006201","GSE140888","GSM4189695","Small intestine","RNA-Seq","Mus musculus",NA,"""tag: C57BL/6""_""tissue: small intestinal organoids""_""treatment: Day 3, no stimulation""" "Ods006202","GSE140888","GSM4189696","Small intestine","RNA-Seq","Mus musculus",NA,"""tag: C57BL/6""_""tissue: small intestinal organoids""_""treatment: Day 3, no stimulation""" "Ods006203","GSE140888","GSM4189697","Small intestine","RNA-Seq","Mus musculus",NA,"""tag: C57BL/6""_""tissue: small intestinal organoids""_""treatment: Day 3, no stimulation""" "Ods006339","GSE141531","GSM4205749","Retina","RNA-Seq","Homo sapiens","32211407","""tissue: iPSC-derived retinal organoids""_""genotype: non-phenotype control""_""developmental stage: mid-stage""_""differentiation day: 90""" "Ods006340","GSE141531","GSM4205750","Retina","RNA-Seq","Homo sapiens","32211407","""tissue: iPSC-derived retinal organoids""_""genotype: non-phenotype control""_""developmental stage: mid-stage""_""differentiation day: 120""" "Ods006341","GSE141531","GSM4205751","Retina","RNA-Seq","Homo sapiens","32211407","""tissue: iPSC-derived retinal organoids""_""genotype: non-phenotype control""_""developmental stage: mid-stage""_""differentiation day: 150""" "Ods006342","GSE141531","GSM4205752","Retina","RNA-Seq","Homo sapiens","32211407","""tissue: iPSC-derived retinal organoids""_""genotype: non-phenotype control""_""developmental stage: mid-stage""_""differentiation day: 180""" "Ods006343","GSE141531","GSM4205753","Retina","RNA-Seq","Homo sapiens","32211407","""tissue: iPSC-derived retinal organoids""_""genotype: non-phenotype control""_""developmental stage: late-stage""_""differentiation day: 230""" "Ods006587","GSE142505","GSM4230637","Midbrain","RNA-Seq","Homo sapiens",NA,"""cell type: H9 hESC-derived NPC""" "Ods006588","GSE142505","GSM4230638","Midbrain","RNA-Seq","Homo sapiens",NA,"""cell type: H9 hESC-derived NPC""" "Ods006589","GSE142505","GSM4230639","Midbrain","RNA-Seq","Homo sapiens",NA,"""cell type: H9 hESC-derived NPC""" "Ods006591","GSE142505","GSM4230641","Midbrain","RNA-Seq","Homo sapiens",NA,"""cell type: H9 hESC-derived NPC""" "Ods006592","GSE142505","GSM4230642","Midbrain","RNA-Seq","Homo sapiens",NA,"""cell type: H9 hESC-derived NPC""" "Ods006593","GSE142505","GSM4230643","Midbrain","RNA-Seq","Homo sapiens",NA,"""cell type: H9 hESC-derived NPC""" "Ods006594","GSE142505","GSM4230644","Midbrain","RNA-Seq","Homo sapiens",NA,"""cell type: H9 hESC-derived NPC""" "Ods006595","GSE142505","GSM4230645","Midbrain","RNA-Seq","Homo sapiens",NA,"""cell type: H9 hESC-derived NPC""" "Ods006729","GSE144192","GSM4317754","Brain","RNA-Seq","Homo sapiens","32923624","""culture: STEMdiff Cerebral Organoid Kit - STEMCELL Technologies #08570""_""shRNA: control lentivector""_""""_""""" "Ods006730","GSE144192","GSM4317755","Brain","RNA-Seq","Homo sapiens","32923624","""culture: STEMdiff Cerebral Organoid Kit - STEMCELL Technologies #08570""_""shRNA: control lentivector""_""""_""""" "Ods006731","GSE144192","GSM4317756","Brain","RNA-Seq","Homo sapiens","32923624","""culture: STEMdiff Cerebral Organoid Kit - STEMCELL Technologies #08570""_""shRNA: control lentivector""_""""_""""" "Ods006778","GSE144553","GSM4288824","Lung","scRNA-Seq","Mus musculus","32750316","""strain: C57BL/6""_""tissue: Lung""" "Ods006805","GSE145069","GSM4305719","Retina","RNA-Seq","Homo sapiens","32531194","""cell type: human pluripotent stem cell-derived retinal ganglion cells""_""passage: p21""_""genotype/variation: WT Optineurin (OPTN) gene""_""time point: 45 days of differentiation with additional 10 days after RGCs purification""" "Ods006806","GSE145069","GSM4305720","Retina","RNA-Seq","Homo sapiens","32531194","""cell type: human pluripotent stem cell-derived retinal ganglion cells""_""passage: p22""_""genotype/variation: WT Optineurin (OPTN) gene""_""time point: 45 days of differentiation with additional 10 days after RGCs purification""" "Ods006807","GSE145069","GSM4305721","Retina","RNA-Seq","Homo sapiens","32531194","""cell type: human pluripotent stem cell-derived retinal ganglion cells""_""passage: p24""_""genotype/variation: WT Optineurin (OPTN) gene""_""time point: 45 days of differentiation with additional 10 days after RGCs purification""" "Ods006808","GSE145069","GSM4305722","Retina","RNA-Seq","Homo sapiens","32531194","""cell type: human pluripotent stem cell-derived retinal ganglion cells""_""passage: p25""_""genotype/variation: WT Optineurin (OPTN) gene""_""time point: 45 days of differentiation with additional 10 days after RGCs purification""" "Ods006858","GSE145386","GSM4317597","Brain","RNA-Seq","Homo sapiens","34354063","""cell type: Human induced pluripotent stem cell derived""_""developmental stage: Organoid""_""region: Brain""" "Ods006859","GSE145386","GSM4317598","Brain","RNA-Seq","Homo sapiens","34354063","""cell type: Human induced pluripotent stem cell derived""_""developmental stage: Organoid""_""region: Brain""" "Ods006860","GSE145386","GSM4317599","Brain","RNA-Seq","Homo sapiens","34354063","""cell type: Human induced pluripotent stem cell derived""_""developmental stage: Organoid""_""region: Brain""" "Ods006861","GSE145386","GSM4317600","Brain","RNA-Seq","Homo sapiens","34354063","""cell type: Human induced pluripotent stem cell derived""_""developmental stage: Organoid""_""region: Brain""" "Ods006862","GSE145386","GSM4317601","Brain","RNA-Seq","Homo sapiens","34354063","""cell type: Human induced pluripotent stem cell derived""_""developmental stage: Organoid""_""region: Brain""" "Ods006863","GSE145386","GSM4317602","Brain","RNA-Seq","Homo sapiens","34354063","""cell type: Human induced pluripotent stem cell derived""_""developmental stage: Organoid""_""region: Brain""" "Ods006864","GSE145386","GSM4317603","Brain","RNA-Seq","Homo sapiens","34354063","""cell type: Human induced pluripotent stem cell derived""_""developmental stage: Organoid""_""region: Brain""" "Ods006865","GSE145386","GSM4317604","Brain","RNA-Seq","Homo sapiens","34354063","""cell type: Human induced pluripotent stem cell derived""_""developmental stage: Organoid""_""region: Brain""" "Ods006866","GSE145386","GSM4317605","Brain","RNA-Seq","Homo sapiens","34354063","""cell type: Human induced pluripotent stem cell derived""_""developmental stage: Organoid""_""region: Brain""" "Ods006867","GSE145386","GSM4317606","Brain","RNA-Seq","Homo sapiens","34354063","""cell type: Human induced pluripotent stem cell derived""_""developmental stage: Organoid""_""region: Brain""" "Ods006868","GSE145386","GSM4317607","Brain","RNA-Seq","Homo sapiens","34354063","""cell type: Human induced pluripotent stem cell derived""_""developmental stage: Organoid""_""region: Brain""" "Ods006869","GSE145386","GSM4317608","Brain","RNA-Seq","Homo sapiens","34354063","""cell type: Human induced pluripotent stem cell derived""_""developmental stage: Organoid""_""region: Brain""" "Ods007437","GSE146339","GSM4378496","Brain","RNA-Seq","Homo sapiens","33852833","""individual: control4""_""Sex: male""_""genotype: control""_""tissue: iPSC-derived 3D cerebral organoids""_""age: 105 days""_""treatment of rna sample: Poly(A) selection""_""biological replicate no.: 1""" "Ods007438","GSE146339","GSM4378497","Brain","RNA-Seq","Homo sapiens","33852833","""individual: control5""_""Sex: male""_""genotype: control""_""tissue: iPSC-derived 3D cerebral organoids""_""age: 105 days""_""treatment of rna sample: Poly(A) selection""_""biological replicate no.: 2""" "Ods007439","GSE146339","GSM4378498","Brain","RNA-Seq","Homo sapiens","33852833","""individual: control6""_""Sex: male""_""genotype: control""_""tissue: iPSC-derived 3D cerebral organoids""_""age: 105 days""_""treatment of rna sample: Poly(A) selection""_""biological replicate no.: 3""" "Ods007443","GSE146339","GSM4378490","Brain","RNA-Seq","Homo sapiens","33852833","""individual: control1""_""Sex: male""_""genotype: control""_""tissue: iPSC-derived 3D cerebral organoids""_""age: 28 days""_""treatment of rna sample: Poly(A) selection""_""biological replicate no.: 1""" "Ods007444","GSE146339","GSM4378491","Brain","RNA-Seq","Homo sapiens","33852833","""individual: control2""_""Sex: male""_""genotype: control""_""tissue: iPSC-derived 3D cerebral organoids""_""age: 28 days""_""treatment of rna sample: Poly(A) selection""_""biological replicate no.: 2""" "Ods007445","GSE146339","GSM4378492","Brain","RNA-Seq","Homo sapiens","33852833","""individual: control3""_""Sex: male""_""genotype: control""_""tissue: iPSC-derived 3D cerebral organoids""_""age: 28 days""_""treatment of rna sample: Poly(A) selection""_""biological replicate no.: 3""" "Ods007507","GSE146878","GSM4408284","Brain","RNA-Seq","Homo sapiens",NA,"""date: Day 28""_""phenotype: WT""_""tissue type: Organoids""" "Ods007508","GSE146878","GSM4408285","Brain","RNA-Seq","Homo sapiens",NA,"""date: Day 28""_""phenotype: WT""_""tissue type: Organoids""" "Ods007511","GSE146878","GSM4408288","Brain","RNA-Seq","Homo sapiens",NA,"""date: Day 56""_""phenotype: WT""_""tissue type: Organoids""" "Ods007512","GSE146878","GSM4408289","Brain","RNA-Seq","Homo sapiens",NA,"""date: Day 56""_""phenotype: WT""_""tissue type: Organoids""" "Ods007515","GSE146878","GSM4408292","Brain","RNA-Seq","Homo sapiens",NA,"""date: Day 84""_""phenotype: WT""_""tissue type: Organoids""" "Ods007516","GSE146878","GSM4408293","Brain","RNA-Seq","Homo sapiens",NA,"""date: Day 84""_""phenotype: WT""_""tissue type: Organoids""" "Ods007519","GSE146878","GSM4989038","Brain","RNA-Seq","Homo sapiens",NA,"""date: Day 56""_""phenotype: Control""_""tissue type: Organoids""" "Ods007520","GSE146878","GSM4989039","Brain","RNA-Seq","Homo sapiens",NA,"""date: Day 56""_""phenotype: Control""_""tissue type: Organoids""" "Ods007531","GSE147133","GSM4419039","Colon","RNA-Seq","Homo sapiens","32891909","""matrix conditions: Matrigel""" "Ods007532","GSE147133","GSM4419040","Colon","RNA-Seq","Homo sapiens","32891909","""matrix conditions: Matrigel""" "Ods007533","GSE147133","GSM4419041","Colon","RNA-Seq","Homo sapiens","32891909","""matrix conditions: Matrigel""" "Ods007534","GSE147133","GSM4419042","Colon","RNA-Seq","Homo sapiens","32891909","""matrix conditions: Matrigel""" "Ods007535","GSE147133","GSM4419043","Colon","RNA-Seq","Homo sapiens","32891909","""matrix conditions: Matrigel""" "Ods007536","GSE147133","GSM4419044","Colon","RNA-Seq","Homo sapiens","32891909","""matrix conditions: Matrigel""" "Ods007537","GSE147133","GSM4419045","Colon","RNA-Seq","Homo sapiens","32891909","""matrix conditions: QGel CN99""" "Ods007538","GSE147133","GSM4419046","Colon","RNA-Seq","Homo sapiens","32891909","""matrix conditions: QGel CN99""" "Ods007539","GSE147133","GSM4419047","Colon","RNA-Seq","Homo sapiens","32891909","""matrix conditions: QGel CN99""" "Ods007540","GSE147133","GSM4419048","Colon","RNA-Seq","Homo sapiens","32891909","""matrix conditions: QGel CN99""" "Ods007541","GSE147133","GSM4419049","Colon","RNA-Seq","Homo sapiens","32891909","""matrix conditions: QGel CN99""" "Ods007542","GSE147133","GSM4419050","Colon","RNA-Seq","Homo sapiens","32891909","""matrix conditions: QGel CN99""" "Ods007639","GSE147206","GSM4420311","Skin","scRNA-Seq","Homo sapiens","32494013","""tissue type: hESC-derived skin organoid""_""passages: 35""" "Ods007654","GSE147735","GSM4443940","Proximal tubules","RNA-Seq","Homo sapiens",NA,"""tissue: Kidney; Proximal Tubule""_""cell type: Primary cultured cells in 3D matrix""_""passages: -""" "Ods007655","GSE147735","GSM4443941","Proximal tubules","RNA-Seq","Homo sapiens",NA,"""tissue: Kidney; Proximal Tubule""_""cell type: Primary cultured cells in 3D matrix""_""passages: -""" "Ods007656","GSE147863","GSM4447249","Kidney","RNA-Seq","Homo sapiens","32333836","""tissue: kidney organoid""_""10x barcode: 10X Barcode H3""" "Ods007708","GSE148366","GSM4462956","Small intestine","scRNA-Seq","Mus musculus","32939089","""tissue: Small intestinal organoids""_""days in differentiation medium: 10""_""c. parvum infected: No""_""organ on a chip: No""" "Ods007713","GSE148695","GSM5100840","Colon","RNA-Seq","Mus musculus","34582804","""genotyping: Ctrl sgRNA""_""intestine part: Colonic Organoid""_""""" "Ods007714","GSE148695","GSM5100841","Colon","RNA-Seq","Mus musculus","34582804","""genotyping: Ctrl sgRNA""_""intestine part: Colonic Organoid""_""""" "Ods007715","GSE148695","GSM5100842","Colon","RNA-Seq","Mus musculus","34582804","""genotyping: Ctrl sgRNA""_""intestine part: Colonic Organoid""_""""" "Ods007728","GSE148695","GSM5453662","Colon","RNA-Seq","Mus musculus","34582804","""genotyping: Wild Type""_""intestine part: Colon""_""""" "Ods007729","GSE148695","GSM5453663","Colon","RNA-Seq","Mus musculus","34582804","""genotyping: Wild Type""_""intestine part: Colon""_""""" "Ods007730","GSE148695","GSM5453664","Colon","RNA-Seq","Mus musculus","34582804","""genotyping: Wild Type""_""intestine part: Colon""_""""" "Ods007731","GSE148695","GSM5100858","Ascending colon","RNA-Seq","Homo sapiens","34582804","""genotyping: Control""_""intestine part: Ascending Colon""" "Ods007732","GSE148695","GSM5100859","Ascending colon","RNA-Seq","Homo sapiens","34582804","""genotyping: Control""_""intestine part: Ascending Colon""" "Ods007733","GSE148695","GSM5100860","Ascending colon","RNA-Seq","Homo sapiens","34582804","""genotyping: Control""_""intestine part: Ascending Colon""" "Ods007734","GSE148695","GSM5100861","Ascending colon","RNA-Seq","Homo sapiens","34582804","""genotyping: Control""_""intestine part: Ascending Colon""" "Ods007735","GSE148695","GSM5100862","Ascending colon","RNA-Seq","Homo sapiens","34582804","""genotyping: Control""_""intestine part: Ascending Colon""" "Ods007741","GSE148695","GSM5100868","Duodenum","RNA-Seq","Homo sapiens","34582804","""cluture condition: High Wnt Medium""_""intestine part: Duodenal""" "Ods007742","GSE148695","GSM5100869","Duodenum","RNA-Seq","Homo sapiens","34582804","""cluture condition: High Wnt Medium""_""intestine part: Duodenal""" "Ods007743","GSE148695","GSM5100870","Duodenum","RNA-Seq","Homo sapiens","34582804","""cluture condition: High Wnt Medium""_""intestine part: Duodenal""" "Ods007744","GSE148695","GSM5100871","Duodenum","RNA-Seq","Homo sapiens","34582804","""cluture condition: High Wnt Medium""_""intestine part: Duodenal""" "Ods007745","GSE148695","GSM5100872","Colon","RNA-Seq","Homo sapiens","34582804","""cluture condition: High Wnt Medium""_""intestine part: Colonic""" "Ods007746","GSE148695","GSM5100873","Colon","RNA-Seq","Homo sapiens","34582804","""cluture condition: High Wnt Medium""_""intestine part: Colonic""" "Ods007747","GSE148695","GSM5100874","Colon","RNA-Seq","Homo sapiens","34582804","""cluture condition: High Wnt Medium""_""intestine part: Colonic""" "Ods007748","GSE148695","GSM5100875","Colon","RNA-Seq","Homo sapiens","34582804","""cluture condition: High Wnt Medium""_""intestine part: Colonic""" "Ods007811","GSE149312","GSM4499449","Intestine","RNA-Seq","Homo sapiens","32358202","""genotype: Wildtype""_""tissue: Intestinal organoids""" "Ods007812","GSE149312","GSM4499451","Intestine","RNA-Seq","Homo sapiens","32358202","""genotype: Wildtype""_""tissue: Intestinal organoids""" "Ods007817","GSE149312","GSM4499463","Intestine","RNA-Seq","Homo sapiens","32358202","""genotype: Wildtype""_""tissue: Intestinal organoids""" "Ods007818","GSE149312","GSM4499465","Intestine","RNA-Seq","Homo sapiens","32358202","""genotype: Wildtype""_""tissue: Intestinal organoids""" "Ods007827","GSE149312","GSM4499486","Intestine","RNA-Seq","Homo sapiens","32358202","""genotype: Wildtype""_""tissue: Intestinal organoids""" "Ods007828","GSE149312","GSM4499489","Intestine","RNA-Seq","Homo sapiens","32358202","""genotype: Wildtype""_""tissue: Intestinal organoids""" "Ods007829","GSE149312","GSM4499491","Intestine","RNA-Seq","Homo sapiens","32358202","""genotype: Wildtype""_""tissue: Intestinal organoids""" "Ods007830","GSE149312","GSM4499493","Intestine","RNA-Seq","Homo sapiens","32358202","""genotype: Wildtype""_""tissue: Intestinal organoids""" "Ods007831","GSE149312","GSM4499496","Intestine","RNA-Seq","Homo sapiens","32358202","""genotype: Wildtype""_""tissue: Intestinal organoids""" "Ods007832","GSE149312","GSM4499498","Intestine","RNA-Seq","Homo sapiens","32358202","""genotype: Wildtype""_""tissue: Intestinal organoids""" "Ods007860","GSE149799","GSM4512821","Cerebral cortex","RNA-Seq","Homo sapiens","33773104","""tissue: cortical brain organoids""" "Ods007861","GSE149799","GSM4512822","Cerebral cortex","RNA-Seq","Homo sapiens","33773104","""tissue: cortical brain organoids""" "Ods007862","GSE149799","GSM4512823","Cerebral cortex","RNA-Seq","Homo sapiens","33773104","""tissue: cortical brain organoids""" "Ods007876","GSE150027","GSM4520885","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 53""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007878","GSE150027","GSM4520887","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 32""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007880","GSE150027","GSM4520889","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 53""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007882","GSE150027","GSM4520891","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 59""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007884","GSE150027","GSM4520893","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 47""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007886","GSE150027","GSM4520895","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 50""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007888","GSE150027","GSM4520897","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 52""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007890","GSE150027","GSM4520899","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 52""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007892","GSE150027","GSM4520901","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 70""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007894","GSE150027","GSM4520903","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 70""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007896","GSE150027","GSM4520905","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 68""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007898","GSE150027","GSM4520907","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 62""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007900","GSE150027","GSM4520909","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 65""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007902","GSE150027","GSM4520911","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 63""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007904","GSE150027","GSM4520913","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 50""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007906","GSE150027","GSM4520915","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 61""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007908","GSE150027","GSM4520917","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 64""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007910","GSE150027","GSM4520919","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 34""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007912","GSE150027","GSM4520921","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 73""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007914","GSE150027","GSM4520923","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 67""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007916","GSE150027","GSM4520925","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 56""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007918","GSE150027","GSM4520927","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 74""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007920","GSE150027","GSM4520929","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 54""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007922","GSE150027","GSM4520931","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 64""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007924","GSE150027","GSM4520933","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 64""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007926","GSE150027","GSM4520935","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 58""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007928","GSE150027","GSM4520937","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 60""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007930","GSE150027","GSM4520939","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 71""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007932","GSE150027","GSM4520941","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 53""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007934","GSE150027","GSM4520943","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 59""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007936","GSE150027","GSM4520945","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 61""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007938","GSE150027","GSM4520947","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 66""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007940","GSE150027","GSM4520949","Proximal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Male""_""treatment: CTL""_""age: 34""_""tissue: Proximal""_""sample type: RNA-sequencing""" "Ods007942","GSE150027","GSM4520951","Distal colon","RNA-Seq","Homo sapiens","33432071","""cell type: Colon Organoid""_""gender: Female""_""treatment: CTL""_""age: 22""_""tissue: Distal""_""sample type: RNA-sequencing""" "Ods007993","GSE150697","GSM4556895","Small intestine","RNA-Seq","Mus musculus","33757992","""tissue: intestinal organoids""_""tissue source: small intestine""_""genotype: WT""" "Ods007994","GSE150697","GSM4556896","Small intestine","RNA-Seq","Mus musculus","33757992","""tissue: intestinal organoids""_""tissue source: small intestine""_""genotype: WT""" "Ods007995","GSE150697","GSM4556897","Small intestine","RNA-Seq","Mus musculus","33757992","""tissue: intestinal organoids""_""tissue source: small intestine""_""genotype: WT""" "Ods008053","GSE151190","GSM4568320","Midbrain","RNA-Seq","Homo sapiens","33597231","""cell type: H9 hESC""_""timepoint: DIV 0""_""genotype: wild type""" "Ods008055","GSE151190","GSM4568322","Midbrain","RNA-Seq","Homo sapiens","33597231","""cell type: H9 hESC-derived Midbrain Organoid""_""timepoint: DIV 4""_""genotype: wild type""" "Ods008057","GSE151190","GSM4568324","Midbrain","RNA-Seq","Homo sapiens","33597231","""cell type: H9 hESC-derived Midbrain Organoid""_""timepoint: DIV 15""_""genotype: wild type""" "Ods008059","GSE151190","GSM4568326","Midbrain","RNA-Seq","Homo sapiens","33597231","""cell type: H9 hESC-derived Midbrain Organoid""_""timepoint: DIV 30""_""genotype: wild type""" "Ods008155","GSE151818","GSM4591408","Embryoid body","RNA-Seq","Homo sapiens",NA,"""cell type: hiPSC-derived embryoid body""_""disease state: Healthy/ Control""_""""" "Ods008156","GSE151818","GSM4591409","Embryoid body","RNA-Seq","Homo sapiens",NA,"""cell type: hiPSC-derived embryoid body""_""disease state: Healthy/ Control""_""""" "Ods008157","GSE151818","GSM4591410","Embryoid body","RNA-Seq","Homo sapiens",NA,"""cell type: hiPSC-derived embryoid body""_""disease state: Healthy/ Control""_""""" "Ods008158","GSE151818","GSM4591411","Forebrain","RNA-Seq","Homo sapiens",NA,"""cell type: hiPSC-derived organoid""_""disease state: Healthy/ Control""_""""" "Ods008159","GSE151818","GSM4591412","Forebrain","RNA-Seq","Homo sapiens",NA,"""cell type: hiPSC-derived organoid""_""disease state: Healthy/ Control""_""""" "Ods008160","GSE151818","GSM4591413","Forebrain","RNA-Seq","Homo sapiens",NA,"""cell type: hiPSC-derived organoid""_""disease state: Healthy/ Control""_""""" "Ods008161","GSE151818","GSM4591414","Forebrain","RNA-Seq","Homo sapiens",NA,"""cell type: hiPSC-derived organoid""_""disease state: Healthy/ Control""_""""" "Ods008162","GSE151818","GSM4591415","Forebrain","RNA-Seq","Homo sapiens",NA,"""cell type: hiPSC-derived organoid""_""disease state: Healthy/ Control""_""""" "Ods008163","GSE151818","GSM4591416","Forebrain","RNA-Seq","Homo sapiens",NA,"""cell type: hiPSC-derived organoid""_""disease state: Healthy/ Control""_""""" "Ods008164","GSE151818","GSM4591417","Forebrain","RNA-Seq","Homo sapiens",NA,"""cell type: hiPSC-derived organoid""_""disease state: Healthy/ Control""_""""" "Ods008165","GSE151818","GSM4591418","Forebrain","RNA-Seq","Homo sapiens",NA,"""cell type: hiPSC-derived organoid""_""disease state: Healthy/ Control""_""""" "Ods008166","GSE151818","GSM4591419","Forebrain","RNA-Seq","Homo sapiens",NA,"""cell type: hiPSC-derived organoid""_""disease state: Healthy/ Control""_""""" "Ods008283","GSE152586","GSM4618451","Alveolus","RNA-Seq","Homo sapiens","33128895","""tissue: Lung""_""cell type: alveolar type 2 cells""_""infection status: without infection""" "Ods008284","GSE152586","GSM4618452","Alveolus","RNA-Seq","Homo sapiens","33128895","""tissue: Lung""_""cell type: alveolar type 2 cells""_""infection status: without infection""" "Ods008285","GSE152586","GSM4618453","Alveolus","RNA-Seq","Homo sapiens","33128895","""tissue: Lung""_""cell type: alveolar type 2 cells""_""infection status: without infection""" "Ods008299","GSE153075","GSM4633804","Embryoid body","RNA-Seq","Homo sapiens",NA,"""cell type: iPSC-derived organoid""_""time point: Day 100""" "Ods008300","GSE153075","GSM4633805","Intestine","RNA-Seq","Homo sapiens",NA,"""cell type: iPSC-derived organoid""_""time point: Day 100""" "Ods008322","GSE153101","GSM4630032","Retina","RNA-Seq","Homo sapiens","33513359","""age: d125""_""genotype: WT""" "Ods008323","GSE153101","GSM4630033","Retina","RNA-Seq","Homo sapiens","33513359","""age: d125""_""genotype: WT""" "Ods008324","GSE153101","GSM4630034","Retina","RNA-Seq","Homo sapiens","33513359","""age: d125""_""genotype: WT""" "Ods008325","GSE153101","GSM4630035","Retina","RNA-Seq","Homo sapiens","33513359","""age: d200""_""genotype: WT""" "Ods008326","GSE153101","GSM4630036","Retina","RNA-Seq","Homo sapiens","33513359","""age: d200""_""genotype: WT""" "Ods008327","GSE153101","GSM4630037","Retina","RNA-Seq","Homo sapiens","33513359","""age: d200""_""genotype: WT""" "Ods008328","GSE153101","GSM4630038","Retina","RNA-Seq","Homo sapiens","33513359","""age: d200""_""genotype: WT""" "Ods008329","GSE153101","GSM4630039","Retina","RNA-Seq","Homo sapiens","33513359","""age: d90""_""genotype: WT""" "Ods008330","GSE153101","GSM4630040","Retina","RNA-Seq","Homo sapiens","33513359","""age: d90""_""genotype: WT""" "Ods008331","GSE153101","GSM4630041","Retina","RNA-Seq","Homo sapiens","33513359","""age: d90""_""genotype: WT""" "Ods008332","GSE153101","GSM4630042","Retina","RNA-Seq","Homo sapiens","33513359","""age: d150""_""genotype: WT""" "Ods008333","GSE153101","GSM4630043","Retina","RNA-Seq","Homo sapiens","33513359","""age: d150""_""genotype: WT""" "Ods008334","GSE153101","GSM4630044","Retina","RNA-Seq","Homo sapiens","33513359","""age: d150""_""genotype: WT""" "Ods008348","GSE153101","GSM4630058","Retina","RNA-Seq","Homo sapiens","33513359","""age: d120""_""genotype: WT""" "Ods008349","GSE153101","GSM4630059","Retina","RNA-Seq","Homo sapiens","33513359","""age: d120""_""genotype: WT""" "Ods008350","GSE153101","GSM4630060","Retina","RNA-Seq","Homo sapiens","33513359","""age: d120""_""genotype: WT""" "Ods008354","GSE153101","GSM4630064","Retina","RNA-Seq","Homo sapiens","33513359","""age: d200""_""genotype: WT""" "Ods008355","GSE153101","GSM4630065","Retina","RNA-Seq","Homo sapiens","33513359","""age: d200""_""genotype: WT""" "Ods008356","GSE153101","GSM4630066","Retina","RNA-Seq","Homo sapiens","33513359","""age: d200""_""genotype: WT""" "Ods008360","GSE153101","GSM4634064","Retina","scRNA-Seq","Homo sapiens","33513359","""age: d200""_""genotype: WT""_""treatment: Untreated""" "Ods008401","GSE153191","GSM4635426","Colon","RNA-Seq","Homo sapiens",NA,"""tissue: colon mucosa""_""culture: static/matrigel""_""inflammatory trigger: None (T-)""" "Ods008402","GSE153191","GSM4635427","Sigmoid colon","RNA-Seq","Homo sapiens",NA,"""tissue: sigmoid colon mucosa""_""culture: static/matrigel""_""inflammatory trigger: None (T-)""" "Ods008433","GSE153684","GSM4649172","Fetal stomach","RNA-Seq","Homo sapiens",NA,"""passage: P 13""_""agent: negative paired control""" "Ods008434","GSE153684","GSM4649173","Fetal stomach","RNA-Seq","Homo sapiens",NA,"""passage: P 13""_""agent: negative paired control""" "Ods008435","GSE153684","GSM4649174","Fetal stomach","RNA-Seq","Homo sapiens",NA,"""passage: P 13""_""agent: negative paired control""" "Ods008436","GSE153684","GSM4649175","Fetal stomach","RNA-Seq","Homo sapiens",NA,"""passage: P 18""_""agent: negative paired control""" "Ods008437","GSE153684","GSM4649176","Fetal stomach","RNA-Seq","Homo sapiens",NA,"""passage: P 18""_""agent: negative paired control""" "Ods008438","GSE153684","GSM4649177","Fetal stomach","RNA-Seq","Homo sapiens",NA,"""passage: P 18""_""agent: negative paired control""" "Ods008540","GSE155130","GSM4695937","Brain","RNA-Seq","Homo sapiens",NA,"""cell type: H9 ES-derived cells""_""treatment: cells transfected by control lentivirus""_""genotype: shCtrl""" "Ods008541","GSE155130","GSM4695938","Brain","RNA-Seq","Homo sapiens",NA,"""cell type: H9 ES-derived cells""_""treatment: cells transfected by control lentivirus""_""genotype: shCtrl""" "Ods008576","GSE155384","GSM4700838","Neural tube","RNA-Seq","Homo sapiens",NA,"""cell type: non-elongating organoids""_""time point: day 1""_""agent: 0 uM CHIR""" "Ods008577","GSE155384","GSM4700839","Neural tube","RNA-Seq","Homo sapiens",NA,"""cell type: non-elongating organoids""_""time point: day 1""_""agent: 0 uM CHIR""" "Ods008578","GSE155384","GSM4700840","Neural tube","RNA-Seq","Homo sapiens",NA,"""cell type: non-elongating organoids""_""time point: day 1""_""agent: 0 uM CHIR""" "Ods008582","GSE155384","GSM4700844","Neural tube","RNA-Seq","Homo sapiens",NA,"""cell type: non-elongating organoids""_""time point: day 3""_""agent: 0 uM CHIR""" "Ods008583","GSE155384","GSM4700845","Neural tube","RNA-Seq","Homo sapiens",NA,"""cell type: non-elongating organoids""_""time point: day 3""_""agent: 0 uM CHIR""" "Ods008584","GSE155384","GSM4700846","Neural tube","RNA-Seq","Homo sapiens",NA,"""cell type: non-elongating organoids""_""time point: day 3""_""agent: 0 uM CHIR""" "Ods008588","GSE155384","GSM4700850","Neural tube","RNA-Seq","Homo sapiens",NA,"""cell type: non-elongating organoids""_""time point: day 5""_""agent: 0 uM CHIR""" "Ods008589","GSE155384","GSM4700851","Neural tube","RNA-Seq","Homo sapiens",NA,"""cell type: non-elongating organoids""_""time point: day 5""_""agent: 0 uM CHIR""" "Ods008590","GSE155384","GSM4700852","Neural tube","RNA-Seq","Homo sapiens",NA,"""cell type: non-elongating organoids""_""time point: day 5""_""agent: 0 uM CHIR""" "Ods008594","GSE155384","GSM4700856","Neural tube","RNA-Seq","Homo sapiens",NA,"""cell type: non-elongating organoids""_""time point: day 7""_""agent: 0 uM CHIR""" "Ods008595","GSE155384","GSM4700857","Neural tube","RNA-Seq","Homo sapiens",NA,"""cell type: non-elongating organoids""_""time point: day 7""_""agent: 0 uM CHIR""" "Ods008596","GSE155384","GSM4700858","Neural tube","RNA-Seq","Homo sapiens",NA,"""cell type: non-elongating organoids""_""time point: day 7""_""agent: 0 uM CHIR""" "Ods008600","GSE155384","GSM4700862","Neural tube","RNA-Seq","Homo sapiens",NA,"""cell type: non-elongating organoids""_""time point: day 10""_""agent: 0 uM CHIR""" "Ods008601","GSE155384","GSM4700863","Neural tube","RNA-Seq","Homo sapiens",NA,"""cell type: non-elongating organoids""_""time point: day 10""_""agent: 0 uM CHIR""" "Ods008602","GSE155384","GSM4700864","Neural tube","RNA-Seq","Homo sapiens",NA,"""cell type: non-elongating organoids""_""time point: day 10""_""agent: 0 uM CHIR""" "Ods008659","GSE156519","GSM4732848","Extrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: human cholangiocyte organoids generated from ERCP""" "Ods008660","GSE156519","GSM4732849","Extrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: human cholangiocyte organoids generated from ERCP""" "Ods008661","GSE156519","GSM4732850","Extrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: human cholangiocyte organoids generated from ERCP""" "Ods008662","GSE156519","GSM4732851","Extrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: human cholangiocyte organoids generated from bile""" "Ods008663","GSE156519","GSM4732852","Extrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: human cholangiocyte organoids generated from bile""" "Ods008664","GSE156519","GSM4732853","Extrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: human cholangiocyte organoids generated from bile""" "Ods008665","GSE156519","GSM4732854","Extrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: human cholangiocyte organoids generated from extrahepatic bile duct""" "Ods008666","GSE156519","GSM4732855","Extrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: human cholangiocyte organoids generated from extrahepatic bile duct""" "Ods008667","GSE156519","GSM4732856","Extrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: human cholangiocyte organoids generated from extrahepatic bile duct""" "Ods008668","GSE156519","GSM4732857","Intrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: human cholangiocyte organoids generated from intrahepatic bile duct""" "Ods008669","GSE156519","GSM4732858","Intrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: human cholangiocyte organoids generated from intrahepatic bile duct""" "Ods008670","GSE156519","GSM4732859","Intrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: human cholangiocyte organoids generated from intrahepatic bile duct""" "Ods008671","GSE156519","GSM5133484","Extrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: human cholangiocyte organoids generated from ERCP""" "Ods008672","GSE156519","GSM5133485","Extrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: human cholangiocyte organoids generated from ERCP""" "Ods008673","GSE156519","GSM5133486","Extrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: human cholangiocyte organoids generated from ERCP""" "Ods008674","GSE156519","GSM5133487","Extrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: ERCP organoids cultured on human ductal scaffolds""" "Ods008675","GSE156519","GSM5133488","Extrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: ERCP organoids cultured on human ductal scaffolds""" "Ods008676","GSE156519","GSM5133489","Extrahepatic bile duct","RNA-Seq","Homo sapiens",NA,"""tissue: ERCP organoids cultured on human ductal scaffolds""" "Ods008691","GSE156760","GSM4743598","Ileum","scRNA-Seq","Homo sapiens","33904651","""treatment: Mock""_""tissue: Ileum Organoids""" "Ods008732","GSE157055","GSM4751782","Lung","RNA-Seq","Homo sapiens",NA,"""condition: Organoid""_""infection: Uninfected""" "Ods008733","GSE157055","GSM4751783","Lung","RNA-Seq","Homo sapiens",NA,"""condition: Organoid""_""infection: Uninfected""" "Ods008734","GSE157055","GSM4751786","Lung","RNA-Seq","Homo sapiens",NA,"""condition: Organoid""_""infection: Uninfected""" "Ods008735","GSE157059","GSM4751828","Ileum","RNA-Seq","Homo sapiens","32995790|34127431|34622168","""condition: Organoid""_""infection: Uninfected""" "Ods008908","GSE158999","GSM4817123","Embryonic heart","scRNA-Seq","Mus musculus","33176168","""cell type source: mouse embryonic stem cells (mESCs)""_""tissue/cell type: Gastruloids""_""day: 7""_""batch: 1""" "Ods008910","GSE159201","GSM4822509","Colon","RNA-Seq","Homo sapiens","33852884","""developmental stage: Day 90 colonic organoid directed differentiation""_""culture media: CK+DCI""_""treatment: Mock""_""days post treatment: 1""_""isolation method: whole organoids""" "Ods008911","GSE159201","GSM4822510","Colon","RNA-Seq","Homo sapiens","33852884","""developmental stage: Day 90 colonic organoid directed differentiation""_""culture media: CK+DCI""_""treatment: Mock""_""days post treatment: 1""_""isolation method: whole organoids""" "Ods008912","GSE159201","GSM4822511","Colon","RNA-Seq","Homo sapiens","33852884","""developmental stage: Day 90 colonic organoid directed differentiation""_""culture media: CK+DCI""_""treatment: Mock""_""days post treatment: 1""_""isolation method: whole organoids""" "Ods008916","GSE159201","GSM4822515","Colon","RNA-Seq","Homo sapiens","33852884","""developmental stage: Day 90 colonic organoid directed differentiation""_""culture media: CK+DCI""_""treatment: Mock""_""days post treatment: 4""_""isolation method: whole organoids""" "Ods008917","GSE159201","GSM4822516","Colon","RNA-Seq","Homo sapiens","33852884","""developmental stage: Day 90 colonic organoid directed differentiation""_""culture media: CK+DCI""_""treatment: Mock""_""days post treatment: 4""_""isolation method: whole organoids""" "Ods008918","GSE159201","GSM4822517","Colon","RNA-Seq","Homo sapiens","33852884","""developmental stage: Day 90 colonic organoid directed differentiation""_""culture media: CK+DCI""_""treatment: Mock""_""days post treatment: 4""_""isolation method: whole organoids""" "Ods008922","GSE159201","GSM4822521","Proximal colon","RNA-Seq","Homo sapiens","33852884","""developmental stage: Day 90 proximal organoid directed differentiation""_""culture media: IM+CK""_""treatment: Mock""_""days post treatment: 1""_""isolation method: whole organoids""" "Ods008923","GSE159201","GSM4822522","Proximal colon","RNA-Seq","Homo sapiens","33852884","""developmental stage: Day 90 proximal organoid directed differentiation""_""culture media: IM+CK""_""treatment: Mock""_""days post treatment: 1""_""isolation method: whole organoids""" "Ods008924","GSE159201","GSM4822523","Proximal colon","RNA-Seq","Homo sapiens","33852884","""developmental stage: Day 90 proximal organoid directed differentiation""_""culture media: IM+CK""_""treatment: Mock""_""days post treatment: 1""_""isolation method: whole organoids""" "Ods008928","GSE159201","GSM4822527","Proximal colon","RNA-Seq","Homo sapiens","33852884","""developmental stage: Day 90 proximal organoid directed differentiation""_""culture media: IM+CK""_""treatment: Mock""_""days post treatment: 4""_""isolation method: whole organoids""" "Ods008929","GSE159201","GSM4822528","Proximal colon","RNA-Seq","Homo sapiens","33852884","""developmental stage: Day 90 proximal organoid directed differentiation""_""culture media: IM+CK""_""treatment: Mock""_""days post treatment: 4""_""isolation method: whole organoids""" "Ods008930","GSE159201","GSM4822529","Proximal colon","RNA-Seq","Homo sapiens","33852884","""developmental stage: Day 90 proximal organoid directed differentiation""_""culture media: IM+CK""_""treatment: Mock""_""days post treatment: 4""_""isolation method: whole organoids""" "Ods009123","GSE161928","GSM4923430","Liver","RNA-Seq","Mus musculus",NA,"""strain: BALB/C""_""tissue: liver""_""day: day 7 after cultured""" "Ods009200","GSE163282","GSM4976569","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 0""_""age: 22""_""tissue: L""_""center: UVA""_""smokingstatus: Never""" "Ods009202","GSE163282","GSM4976571","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 1""_""age: 34""_""tissue: R""_""center: UVA""_""smokingstatus: Former""" "Ods009204","GSE163282","GSM4976573","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 2""_""age: 66""_""tissue: R""_""center: UVA""_""smokingstatus: Never""" "Ods009206","GSE163282","GSM4976575","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 3""_""age: 61""_""tissue: L""_""center: UVA""_""smokingstatus: Current""" "Ods009208","GSE163282","GSM4976577","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 4""_""age: 59""_""tissue: R""_""center: UVA""_""smokingstatus: Never""" "Ods009210","GSE163282","GSM4976579","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 5""_""age: 53""_""tissue: R""_""center: UVA""_""smokingstatus: Never""" "Ods009212","GSE163282","GSM4976581","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 6""_""age: 71""_""tissue: R""_""center: UVA""_""smokingstatus: Never""" "Ods009214","GSE163282","GSM4976583","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 8""_""age: 58""_""tissue: R""_""center: UVA""_""smokingstatus: Never""" "Ods009216","GSE163282","GSM4976585","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 9""_""age: 64""_""tissue: R""_""center: UVA""_""smokingstatus: Never""" "Ods009218","GSE163282","GSM4976587","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 10""_""age: 64""_""tissue: L""_""center: UVA""_""smokingstatus: Never""" "Ods009220","GSE163282","GSM4976589","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 11""_""age: 54""_""tissue: R""_""center: UVA""_""smokingstatus: Never""" "Ods009222","GSE163282","GSM4976591","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 12""_""age: 74""_""tissue: L""_""center: UVA""_""smokingstatus: Never""" "Ods009224","GSE163282","GSM4976593","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 13""_""age: 56""_""tissue: L""_""center: UVA""_""smokingstatus: Former""" "Ods009226","GSE163282","GSM4976595","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 14""_""age: 67""_""tissue: L""_""center: UVA""_""smokingstatus: Former""" "Ods009228","GSE163282","GSM4976597","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 15""_""age: 73""_""tissue: L""_""center: UVA""_""smokingstatus: Never""" "Ods009230","GSE163282","GSM4976599","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 16""_""age: 34""_""tissue: L""_""center: UVA""_""smokingstatus: Never""" "Ods009232","GSE163282","GSM4976601","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 17""_""age: 64""_""tissue: L""_""center: UVA""_""smokingstatus: Never""" "Ods009234","GSE163282","GSM4976603","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 18""_""age: 61""_""tissue: R""_""center: UVA""_""smokingstatus: Current""" "Ods009236","GSE163282","GSM4976605","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 19""_""age: 50""_""tissue: L""_""center: UVA""_""smokingstatus: Former""" "Ods009238","GSE163282","GSM4976607","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 20""_""age: 63""_""tissue: R""_""center: UVA""_""smokingstatus: Current""" "Ods009240","GSE163282","GSM4976609","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 21""_""age: 65""_""tissue: R""_""center: UVA""_""smokingstatus: Never""" "Ods009242","GSE163282","GSM4976611","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 22""_""age: 62""_""tissue: L""_""center: UVA""_""smokingstatus: Never""" "Ods009244","GSE163282","GSM4976613","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 23""_""age: 68""_""tissue: L""_""center: UVA""_""smokingstatus: Current""" "Ods009246","GSE163282","GSM4976615","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 24""_""age: 70""_""tissue: R""_""center: UVA""_""smokingstatus: Never""" "Ods009248","GSE163282","GSM4976617","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 25""_""age: 70""_""tissue: R""_""center: UVA""_""smokingstatus: Never""" "Ods009250","GSE163282","GSM4976619","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 26""_""age: 52""_""tissue: R""_""center: UVA""_""smokingstatus: Current""" "Ods009252","GSE163282","GSM4976621","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 27""_""age: 52""_""tissue: R""_""center: UVA""_""smokingstatus: Current""" "Ods009254","GSE163282","GSM4976623","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 28""_""age: 50""_""tissue: L""_""center: UVA""_""smokingstatus: Never""" "Ods009256","GSE163282","GSM4976625","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 29""_""age: 47""_""tissue: R""_""center: UVA""_""smokingstatus: Never""" "Ods009258","GSE163282","GSM4976627","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 30""_""age: 59""_""tissue: R""_""center: UVA""_""smokingstatus: Never""" "Ods009260","GSE163282","GSM4976629","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 31""_""age: 53""_""tissue: L""_""center: UVA""_""smokingstatus: Never""" "Ods009262","GSE163282","GSM4976631","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 32""_""age: 53""_""tissue: L""_""center: UVA""_""smokingstatus: Never""" "Ods009264","GSE163282","GSM4976633","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 33""_""age: 32""_""tissue: R""_""center: UVA""_""smokingstatus: Never""" "Ods009266","GSE163282","GSM4976635","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 34""_""age: 60""_""tissue: L""_""center: MGH""_""smokingstatus: Current""" "Ods009268","GSE163282","GSM4976637","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 35""_""age: 55""_""tissue: L""_""center: MGH""_""smokingstatus: Never""" "Ods009270","GSE163282","GSM4976639","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: F""_""treatment: CTL""_""pair: 36""_""age: 55""_""tissue: L""_""center: MGH""_""smokingstatus: Former""" "Ods009272","GSE163282","GSM4976641","Colon","RNA-Seq","Homo sapiens",NA,"""cell type: Colon Organoid""_""Sex: M""_""treatment: CTL""_""pair: 37""_""age: 49""_""tissue: L""_""center: MGH""_""smokingstatus: Never""" "Ods009297","GSE163818","GSM4987904","Thyroid","scRNA-Seq","Mus musculus","34135860","""tissue: Thyroid Organoid""_""cell type: in vitro differentiated cells""_""Stage: a mixture of four different stages of differentiation protocol""" "Ods009318","GSE163952","GSM4991124","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain organoid""_""hsv-1 infection status: no""_""sampling timepoint: NA""_""rna population: rRNA-depleted RNA""" "Ods009319","GSE163952","GSM4991125","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain organoid""_""hsv-1 infection status: no""_""sampling timepoint: NA""_""rna population: rRNA-depleted RNA""" "Ods009320","GSE163952","GSM4991142","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain organoid""_""hsv-1 infection status: no""_""sampling timepoint: NA""_""rna population: rRNA-depleted RNA""" "Ods009321","GSE163952","GSM4991143","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain organoid""_""hsv-1 infection status: no""_""sampling timepoint: NA""_""rna population: rRNA-depleted RNA""" "Ods009405","GSE164376","GSM5008711","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""subject status: healthy control""_""cell type: Human iPSC derieved cortical neurons""_""age: 3 months of differention""" "Ods009406","GSE164376","GSM5008712","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""subject status: healthy control""_""cell type: Human iPSC derieved cortical neurons""_""age: 3 months of differention""" "Ods009407","GSE164376","GSM5008713","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""subject status: healthy control""_""cell type: Human iPSC derieved cortical neurons""_""age: 3 months of differention""" "Ods009408","GSE164376","GSM5008714","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""subject status: healthy control""_""cell type: Human iPSC derieved cortical neurons""_""age: 3 months of differention""" "Ods009409","GSE164376","GSM5008715","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""subject status: healthy control""_""cell type: Human iPSC derieved cortical neurons""_""age: 3 months of differention""" "Ods009410","GSE164376","GSM5008716","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""subject status: healthy control""_""cell type: Human iPSC derieved cortical neurons""_""age: 3 months of differention""" "Ods009411","GSE164376","GSM5008717","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""subject status: healthy control""_""cell type: Human iPSC derieved cortical neurons""_""age: 3 months of differention""" "Ods009412","GSE164376","GSM5008718","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""subject status: healthy control""_""cell type: Human iPSC derieved cortical neurons""_""age: 3 months of differention""" "Ods009413","GSE164376","GSM5008719","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""subject status: healthy control""_""cell type: Human iPSC derieved cortical neurons""_""age: 3 months of differention""" "Ods009492","GSE165158","GSM5027272","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -V condition""_""repeat: 1""" "Ods009493","GSE165158","GSM5027273","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -V condition""_""repeat: 2""" "Ods009494","GSE165158","GSM5027274","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -V condition""_""repeat: 3""" "Ods009495","GSE165158","GSM5027275","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -V condition""_""repeat: 4""" "Ods009496","GSE165158","GSM5027276","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -V condition""_""repeat: 5""" "Ods009497","GSE165158","GSM5027277","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -V condition""_""repeat: 6""" "Ods009498","GSE165158","GSM5027278","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -E condition""_""repeat: 1""" "Ods009499","GSE165158","GSM5027279","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -E condition""_""repeat: 2""" "Ods009500","GSE165158","GSM5027280","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -E condition""_""repeat: 3""" "Ods009501","GSE165158","GSM5027281","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -E condition""_""repeat: 4""" "Ods009502","GSE165158","GSM5027282","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -E condition""_""repeat: 5""" "Ods009503","GSE165158","GSM5027283","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -E condition""_""repeat: 6""" "Ods009504","GSE165158","GSM5027284","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -E condition""_""repeat: 7""" "Ods009505","GSE165158","GSM5027285","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C condition""_""repeat: 1""" "Ods009506","GSE165158","GSM5027286","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C condition""_""repeat: 2""" "Ods009507","GSE165158","GSM5027287","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C condition""_""repeat: 3""" "Ods009508","GSE165158","GSM5027288","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C condition""_""repeat: 4""" "Ods009509","GSE165158","GSM5027289","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C condition""_""repeat: 5""" "Ods009510","GSE165158","GSM5027290","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C condition""_""repeat: 6""" "Ods009511","GSE165158","GSM5027291","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C condition""_""repeat: 7""" "Ods009512","GSE165158","GSM5027292","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -bFGF condition""_""repeat: 1""" "Ods009513","GSE165158","GSM5027293","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -bFGF condition""_""repeat: 2""" "Ods009514","GSE165158","GSM5027294","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -bFGF condition""_""repeat: 3""" "Ods009515","GSE165158","GSM5027295","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -EGF condition""_""repeat: 1""" "Ods009516","GSE165158","GSM5027296","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -EGF condition""_""repeat: 2""" "Ods009517","GSE165158","GSM5027297","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -EGF condition""_""repeat: 3""" "Ods009518","GSE165158","GSM5027298","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with ENR condition""_""repeat: 1""" "Ods009519","GSE165158","GSM5027299","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with ENR condition""_""repeat: 2""" "Ods009520","GSE165158","GSM5027300","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with ENR condition""_""repeat: 3""" "Ods009521","GSE165158","GSM5027301","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with ENR condition""_""repeat: 4""" "Ods009522","GSE165158","GSM5027302","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with ENR condition""_""repeat: 5""" "Ods009523","GSE165158","GSM5027303","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with ENR condition""_""repeat: 6""" "Ods009524","GSE165158","GSM5027304","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with ENR condition""_""repeat: 7""" "Ods009525","GSE165158","GSM5027305","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with ENR +VE condition""_""repeat: 1""" "Ods009526","GSE165158","GSM5027306","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with ENR +VE condition""_""repeat: 2""" "Ods009527","GSE165158","GSM5027307","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with ENR +VE condition""_""repeat: 3""" "Ods009528","GSE165158","GSM5027308","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -GSK3i condition""_""repeat: 1""" "Ods009529","GSE165158","GSM5027309","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -GSK3i condition""_""repeat: 2""" "Ods009530","GSE165158","GSM5027310","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -GSK3i condition""_""repeat: 3""" "Ods009531","GSE165158","GSM5027311","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -VE condition""_""repeat: 1""" "Ods009532","GSE165158","GSM5027312","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -VE condition""_""repeat: 2""" "Ods009533","GSE165158","GSM5027313","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -VE condition""_""repeat: 3""" "Ods009534","GSE165158","GSM5027314","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -VE condition""_""repeat: 4""" "Ods009535","GSE165158","GSM5027315","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -VE condition""_""repeat: 5""" "Ods009536","GSE165158","GSM5027316","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -VE condition""_""repeat: 6""" "Ods009537","GSE165158","GSM5027317","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -VE condition""_""repeat: 7""" "Ods009538","GSE165158","GSM5027318","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -Pex condition""_""repeat: 1""" "Ods009539","GSE165158","GSM5027319","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -Pex condition""_""repeat: 2""" "Ods009540","GSE165158","GSM5027320","Intestine","RNA-Seq","Mus musculus","33420425","""tissue: organoid""_""condition in vitro: organoid with 8C -Pex condition""_""repeat: 3""" "Ods009549","GSE165200","GSM5028163","Lung","RNA-Seq","Homo sapiens",NA,"""tissue: Lung organoid-ALO1""_""agent: None""" "Ods009550","GSE165200","GSM5028164","Lung","RNA-Seq","Homo sapiens",NA,"""tissue: Lung organoid-ALO2""_""agent: None""" "Ods009551","GSE165200","GSM5028165","Lung","RNA-Seq","Homo sapiens",NA,"""tissue: Lung organoid-ALO1""_""agent: None""" "Ods009552","GSE165200","GSM5028166","Lung","RNA-Seq","Homo sapiens",NA,"""tissue: Lung organoid-ALO2""_""agent: None""" "Ods009553","GSE165200","GSM5028167","Lung","RNA-Seq","Homo sapiens",NA,"""tissue: Lung organoid-ALO1""_""agent: None""" "Ods009554","GSE165200","GSM5028168","Lung","RNA-Seq","Homo sapiens",NA,"""tissue: Lung organoid-ALO2""_""agent: None""" "Ods009555","GSE165200","GSM5028169","Lung","RNA-Seq","Homo sapiens",NA,"""tissue: Lung monolayer (submerged)""_""agent: None""" "Ods009556","GSE165200","GSM5028170","Lung","RNA-Seq","Homo sapiens",NA,"""tissue: Lung monolayer (submerged)""_""agent: None""" "Ods009557","GSE165200","GSM5028171","Lung","RNA-Seq","Homo sapiens",NA,"""tissue: Lung monolayer (submerged)""_""agent: None""" "Ods009558","GSE165200","GSM5028172","Lung","RNA-Seq","Homo sapiens",NA,"""tissue: Lung monolayer (submerged)""_""agent: None""" "Ods009559","GSE165200","GSM5028173","Lung","RNA-Seq","Homo sapiens",NA,"""tissue: Lung monolayer (submerged)""_""agent: None""" "Ods009560","GSE165200","GSM5028174","Lung","RNA-Seq","Homo sapiens",NA,"""tissue: Lung organoid-derived ALI model""_""agent: None""" "Ods009561","GSE165200","GSM5028175","Lung","RNA-Seq","Homo sapiens",NA,"""tissue: Lung organoid-derived ALI model""_""agent: None""" "Ods009562","GSE165200","GSM5028178","Alveolus","RNA-Seq","Homo sapiens",NA,"""tissue: Alveolosphere""_""agent: None""" "Ods009563","GSE165200","GSM5028179","Alveolus","RNA-Seq","Homo sapiens",NA,"""tissue: Alveolosphere""_""agent: None""" "Ods009577","GSE166289","GSM5067771","Endometrium","RNA-Seq","Homo sapiens","33876774","""culture stage: cells isolated from endometrial organoid cultures at their 12th in vitro passage""_""cell type: endometrial epithelial cells""" "Ods009578","GSE166289","GSM5067772","Endometrium","RNA-Seq","Homo sapiens","33876774","""culture stage: cells isolated from endometrial organoid cultures at their 9th in vitro passage""_""cell type: endometrial epithelial cells""" "Ods009579","GSE166289","GSM5067773","Endometrium","RNA-Seq","Homo sapiens","33876774","""culture stage: cells isolated from endometrial organoid cultures at their 7th in vitro passage""_""cell type: endometrial epithelial cells""" "Ods009580","GSE166471","GSM5071639","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: WA09 (H9) human embryonicstem cells""_""znf675 genotype: WT""_""treatment: Transction of CRISPR-Cas9 constructs followed by clonal expansion and cortical organoid differentiation""" "Ods009581","GSE166471","GSM5071640","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: WA09 (H9) human embryonicstem cells""_""znf675 genotype: WT""_""treatment: Transction of CRISPR-Cas9 constructs followed by clonal expansion and cortical organoid differentiation""" "Ods009584","GSE166471","GSM5071643","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: WA09 (H9) human embryonicstem cells""_""znf675 genotype: WT""_""treatment: Transction of CRISPR-Cas9 constructs followed by clonal expansion and cortical organoid differentiation""" "Ods009585","GSE166471","GSM5071644","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: WA09 (H9) human embryonicstem cells""_""znf675 genotype: WT""_""treatment: Transction of CRISPR-Cas9 constructs followed by clonal expansion and cortical organoid differentiation""" "Ods009637","GSE167208","GSM5099541","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 10""_""embryoid body formation method: Low attachment U-bottom 96-well plate""" "Ods009638","GSE167208","GSM5099542","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 10""_""embryoid body formation method: Low attachment U-bottom 96-well plate""" "Ods009639","GSE167208","GSM5099543","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 10""_""embryoid body formation method: Low attachment U-bottom 96-well plate""" "Ods009640","GSE167208","GSM5099544","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 10""_""embryoid body formation method: Agarose microwell shape C""" "Ods009641","GSE167208","GSM5099545","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 10""_""embryoid body formation method: Agarose microwell shape C""" "Ods009642","GSE167208","GSM5099546","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 10""_""embryoid body formation method: Agarose microwell shape C""" "Ods009643","GSE167208","GSM5099547","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 10""_""embryoid body formation method: Agarose microwell shape peanut""" "Ods009644","GSE167208","GSM5099548","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 10""_""embryoid body formation method: Agarose microwell shape peanut""" "Ods009645","GSE167208","GSM5099549","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 10""_""embryoid body formation method: Agarose microwell shape peanut""" "Ods009646","GSE167208","GSM5099550","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 10""_""embryoid body formation method: Agarose microwell shape round""" "Ods009647","GSE167208","GSM5099551","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 10""_""embryoid body formation method: Agarose microwell shape round""" "Ods009648","GSE167208","GSM5099552","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 10""_""embryoid body formation method: Agarose microwell shape round""" "Ods009649","GSE167208","GSM5099553","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 10""_""embryoid body formation method: Agarose microwell shape butterfly""" "Ods009650","GSE167208","GSM5099554","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 10""_""embryoid body formation method: Agarose microwell shape butterfly""" "Ods009651","GSE167208","GSM5099555","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 10""_""embryoid body formation method: Agarose microwell shape butterfly""" "Ods009652","GSE167208","GSM5099556","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 20""_""embryoid body formation method: Low attachment U-bottom 96-well plate""" "Ods009653","GSE167208","GSM5099557","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 20""_""embryoid body formation method: Low attachment U-bottom 96-well plate""" "Ods009654","GSE167208","GSM5099558","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 20""_""embryoid body formation method: Low attachment U-bottom 96-well plate""" "Ods009655","GSE167208","GSM5099559","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 20""_""embryoid body formation method: Agarose microwell shape C""" "Ods009656","GSE167208","GSM5099560","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 20""_""embryoid body formation method: Agarose microwell shape C""" "Ods009657","GSE167208","GSM5099561","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 20""_""embryoid body formation method: Agarose microwell shape C""" "Ods009658","GSE167208","GSM5099562","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 20""_""embryoid body formation method: Agarose microwell shape peanut""" "Ods009659","GSE167208","GSM5099563","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 20""_""embryoid body formation method: Agarose microwell shape peanut""" "Ods009660","GSE167208","GSM5099564","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 20""_""embryoid body formation method: Agarose microwell shape peanut""" "Ods009661","GSE167208","GSM5099565","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 20""_""embryoid body formation method: Agarose microwell shape butterfly""" "Ods009662","GSE167208","GSM5099566","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 20""_""embryoid body formation method: Agarose microwell shape butterfly""" "Ods009663","GSE167208","GSM5099567","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 20""_""embryoid body formation method: Agarose microwell shape butterfly""" "Ods009664","GSE167208","GSM5099568","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 20""_""embryoid body formation method: Agarose microwell shape round""" "Ods009665","GSE167208","GSM5099569","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 20""_""embryoid body formation method: Agarose microwell shape round""" "Ods009666","GSE167208","GSM5099570","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 20""_""embryoid body formation method: Agarose microwell shape round""" "Ods009667","GSE167208","GSM5099571","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 40""_""embryoid body formation method: Low attachment U-bottom 96-well plate""" "Ods009668","GSE167208","GSM5099572","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 40""_""embryoid body formation method: Low attachment U-bottom 96-well plate""" "Ods009669","GSE167208","GSM5099573","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 40""_""embryoid body formation method: Low attachment U-bottom 96-well plate""" "Ods009670","GSE167208","GSM5099574","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 40""_""embryoid body formation method: Agarose microwell shape C""" "Ods009671","GSE167208","GSM5099575","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 40""_""embryoid body formation method: Agarose microwell shape C""" "Ods009672","GSE167208","GSM5099576","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 40""_""embryoid body formation method: Agarose microwell shape C""" "Ods009673","GSE167208","GSM5099577","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 40""_""embryoid body formation method: Agarose microwell shape peanut""" "Ods009674","GSE167208","GSM5099578","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 40""_""embryoid body formation method: Agarose microwell shape peanut""" "Ods009675","GSE167208","GSM5099579","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 40""_""embryoid body formation method: Agarose microwell shape peanut""" "Ods009676","GSE167208","GSM5099580","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 40""_""embryoid body formation method: Agarose microwell shape butterfly""" "Ods009677","GSE167208","GSM5099581","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 40""_""embryoid body formation method: Agarose microwell shape butterfly""" "Ods009678","GSE167208","GSM5099582","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 40""_""embryoid body formation method: Agarose microwell shape butterfly""" "Ods009679","GSE167208","GSM5099583","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 40""_""embryoid body formation method: Agarose microwell shape round""" "Ods009680","GSE167208","GSM5099584","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 40""_""embryoid body formation method: Agarose microwell shape round""" "Ods009681","GSE167208","GSM5099585","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 human embryonic stem cells (WA09, WiCell)""_""time point: Day 40""_""embryoid body formation method: Agarose microwell shape round""" "Ods010134","GSE168005","GSM5123132","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 1""_""cell_line: J103""_""treatment: mock""_""timepoint: 6h""" "Ods010135","GSE168005","GSM5123133","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 1""_""cell_line: J103""_""treatment: mock""_""timepoint: 6h""" "Ods010136","GSE168005","GSM5123134","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 1""_""cell_line: J103""_""treatment: mock""_""timepoint: 6h""" "Ods010137","GSE168005","GSM5123135","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 1""_""cell_line: J103""_""treatment: mock""_""timepoint: 6h""" "Ods010138","GSE168005","GSM5123136","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 2""_""cell_line: J109""_""treatment: mock""_""timepoint: 6h""" "Ods010139","GSE168005","GSM5123137","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 2""_""cell_line: J109""_""treatment: mock""_""timepoint: 6h""" "Ods010140","GSE168005","GSM5123138","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 2""_""cell_line: J109""_""treatment: mock""_""timepoint: 6h""" "Ods010141","GSE168005","GSM5123139","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 2""_""cell_line: J109""_""treatment: mock""_""timepoint: 6h""" "Ods010142","GSE168005","GSM5123140","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 1""_""cell_line: J103""_""treatment: mock""_""timepoint: 24h""" "Ods010143","GSE168005","GSM5123141","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 1""_""cell_line: J103""_""treatment: mock""_""timepoint: 24h""" "Ods010144","GSE168005","GSM5123142","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 1""_""cell_line: J103""_""treatment: mock""_""timepoint: 24h""" "Ods010145","GSE168005","GSM5123143","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 1""_""cell_line: J103""_""treatment: mock""_""timepoint: 24h""" "Ods010146","GSE168005","GSM5123144","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 2""_""cell_line: J109""_""treatment: mock""_""timepoint: 24h""" "Ods010147","GSE168005","GSM5123145","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 2""_""cell_line: J109""_""treatment: mock""_""timepoint: 24h""" "Ods010148","GSE168005","GSM5123146","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 2""_""cell_line: J109""_""treatment: mock""_""timepoint: 24h""" "Ods010149","GSE168005","GSM5123147","Ileum","RNA-Seq","Homo sapiens",NA,"""donor: Donor 2""_""cell_line: J109""_""treatment: mock""_""timepoint: 24h""" "Ods010672","GSE171719","GSM5231365","Brain","RNA-Seq","Homo sapiens","34341344","""cell type: iPSCs-derived brain organoids""_""strain: WTC-iPSCs""_""treatment: untreated""" "Ods010673","GSE171719","GSM5231366","Brain","RNA-Seq","Homo sapiens","34341344","""cell type: iPSCs-derived brain organoids""_""strain: WTC-iPSCs""_""treatment: untreated""" "Ods010674","GSE171719","GSM5231367","Brain","RNA-Seq","Homo sapiens","34341344","""cell type: iPSCs-derived brain organoids""_""strain: WTC-iPSCs""_""treatment: untreated""" "Ods010807","GSE174569","GSM5319831","Forebrain","RNA-Seq","Homo sapiens","34471112","""genotype: wildtype (rescue)""_""cell line: P2 CRISPR Rescue""_""tissue: forebrain organoids from patient derived iPSC""_""batch: Batch 2 Rescue_batch""" "Ods010808","GSE174569","GSM5319832","Forebrain","RNA-Seq","Homo sapiens","34471112","""genotype: wildtype (rescue)""_""cell line: P2 CRISPR Rescue""_""tissue: forebrain organoids from patient derived iPSC""_""batch: Batch 2 Rescue_batch""" "Ods010809","GSE174569","GSM5319833","Forebrain","RNA-Seq","Homo sapiens","34471112","""genotype: wildtype (rescue)""_""cell line: P2 CRISPR Rescue""_""tissue: forebrain organoids from patient derived iPSC""_""batch: Batch 2 Rescue_batch""" "Ods010810","GSE174569","GSM5346018","Forebrain","RNA-Seq","Homo sapiens","34471112","""genotype: wildtype""_""cell line: C1""_""batch: Batch_3_case_control""_""""" "Ods010811","GSE174569","GSM5346019","Forebrain","RNA-Seq","Homo sapiens","34471112","""genotype: wildtype""_""cell line: C2""_""batch: Batch_3_case_control""_""""" "Ods010815","GSE174650","GSM5321585","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 0""_""age: 59""_""tissue: R""_""polyp: No""" "Ods010817","GSE174650","GSM5321587","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 1""_""age: 53""_""tissue: R""_""polyp: No""" "Ods010819","GSE174650","GSM5321589","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 2""_""age: 58""_""tissue: R""_""polyp: No""" "Ods010821","GSE174650","GSM5321591","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 3""_""age: 56""_""tissue: L""_""polyp: No""" "Ods010823","GSE174650","GSM5321593","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 4""_""age: 67""_""tissue: L""_""polyp: No""" "Ods010825","GSE174650","GSM5321595","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 5""_""age: 64""_""tissue: L""_""polyp: No""" "Ods010827","GSE174650","GSM5321597","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: NA""_""age: 34""_""tissue: L""_""polyp: No""" "Ods010829","GSE174650","GSM5321599","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 8""_""age: 65""_""tissue: R""_""polyp: Yes""" "Ods010831","GSE174650","GSM5321601","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 9""_""age: 50""_""tissue: L""_""polyp: No""" "Ods010833","GSE174650","GSM5321603","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 10""_""age: 59""_""tissue: R""_""polyp: Yes""" "Ods010835","GSE174650","GSM5321605","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 11""_""age: 50""_""tissue: L""_""polyp: No""" "Ods010837","GSE174650","GSM5321607","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 12""_""age: 60""_""tissue: L""_""polyp: Yes""" "Ods010839","GSE174650","GSM5321609","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 13""_""age: 47""_""tissue: R""_""polyp: No""" "Ods010841","GSE174650","GSM5321611","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 14""_""age: 32""_""tissue: R""_""polyp: No""" "Ods010843","GSE174650","GSM5321613","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 15""_""age: 22""_""tissue: L""_""polyp: No""" "Ods010845","GSE174650","GSM5321615","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 16""_""age: 61""_""tissue: L""_""polyp: No""" "Ods010847","GSE174650","GSM5321617","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 17""_""age: 74""_""tissue: L""_""polyp: Yes""" "Ods010849","GSE174650","GSM5321619","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 18""_""age: 50""_""tissue: L""_""polyp: No""" "Ods010851","GSE174650","GSM5321621","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 19""_""age: 62""_""tissue: L""_""polyp: No""" "Ods010853","GSE174650","GSM5321623","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 20""_""age: 61""_""tissue: R""_""polyp: No""" "Ods010855","GSE174650","GSM5321625","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 21""_""age: 54""_""tissue: R""_""polyp: Yes""" "Ods010857","GSE174650","GSM5321627","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 22""_""age: 70""_""tissue: R""_""polyp: No""" "Ods010859","GSE174650","GSM5321629","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 23""_""age: 63""_""tissue: R""_""polyp: No""" "Ods010861","GSE174650","GSM5321631","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 24""_""age: 53""_""tissue: L""_""polyp: No""" "Ods010863","GSE174650","GSM5321633","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 25""_""age: 34""_""tissue: R""_""polyp: No""" "Ods010865","GSE174650","GSM5321635","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 26""_""age: 66""_""tissue: R""_""polyp: No""" "Ods010867","GSE174650","GSM5321637","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 27""_""age: 64""_""tissue: R""_""polyp: No""" "Ods010869","GSE174650","GSM5321639","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 28""_""age: 64""_""tissue: L""_""polyp: No""" "Ods010871","GSE174650","GSM5321641","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 29""_""age: 73""_""tissue: L""_""polyp: Yes""" "Ods010873","GSE174650","GSM5321643","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 30""_""age: 68""_""tissue: L""_""polyp: No""" "Ods010875","GSE174650","GSM5321645","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 31""_""age: 71""_""tissue: R""_""polyp: No""" "Ods010877","GSE174650","GSM5321647","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 32""_""age: 52""_""tissue: R""_""polyp: No""" "Ods010879","GSE174650","GSM5321649","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 33""_""age: 50""_""tissue: R""_""polyp: No""" "Ods010881","GSE174650","GSM5321651","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 34""_""age: 62""_""tissue: R""_""polyp: Yes""" "Ods010883","GSE174650","GSM5321653","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: M""_""treatment: Control""_""pair: 35""_""age: 51""_""tissue: L""_""polyp: Yes""" "Ods010885","GSE174650","GSM5321655","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 36""_""age: 63""_""tissue: R""_""polyp: Yes""" "Ods010887","GSE174650","GSM5321657","Colon","RNA-Seq","Homo sapiens","34548904","""cell type: Colon Organoid""_""Sex: F""_""treatment: Control""_""pair: 37""_""age: 60""_""tissue: R""_""polyp: Yes""" "Ods010889","GSE175502","GSM5335529","Bile duct","scRNA-Seq","Homo sapiens",NA,"""cell type: ES-derived cholangiocytes""" "Ods010906","GSE175821","GSM5348435","Colon","RNA-Seq","Homo sapiens","34378534","""applied mechanostimulation: N/A""_""cell type: colon epithelial cells""_""air liquid interface: N/A""" "Ods010907","GSE175821","GSM5348436","Colon","RNA-Seq","Homo sapiens","34378534","""applied mechanostimulation: N/A""_""cell type: colon epithelial cells""_""air liquid interface: N/A""" "Ods010908","GSE175821","GSM5348437","Colon","RNA-Seq","Homo sapiens","34378534","""applied mechanostimulation: N/A""_""cell type: colon epithelial cells""_""air liquid interface: N/A""" "Ods010999","GSE178858","GSM5399379","Lung","scRNA-Seq","Homo sapiens","34301945","""cell type: iPSC-derived organoid""" "Ods011000","GSE178858","GSM5399380","Stomach","scRNA-Seq","Homo sapiens","34301945","""cell type: iPSC-derived organoid""" "Ods011019","GSE179438","GSM5418079","Forebrain","RNA-Seq","Homo sapiens","34407456","""cell type source: Normal lung fibroblast IMR90 derived organoids""_""cell subtype: Neurospheres""" "Ods011020","GSE179438","GSM5418080","Forebrain","RNA-Seq","Homo sapiens","34407456","""cell type source: Normal lung fibroblast IMR90 derived organoids""_""cell subtype: Neurospheres""" "Ods011021","GSE179438","GSM5418081","Forebrain","RNA-Seq","Homo sapiens","34407456","""cell type source: Normal lung fibroblast IMR90 derived organoids""_""cell subtype: Neurospheres""" "Ods011022","GSE179438","GSM5418082","Forebrain","RNA-Seq","Homo sapiens","34407456","""cell type source: Normal lung fibroblast IMR90 derived organoids""_""cell subtype: OVB-organoids""" "Ods011023","GSE179438","GSM5418083","Forebrain","RNA-Seq","Homo sapiens","34407456","""cell type source: Normal lung fibroblast IMR90 derived organoids""_""cell subtype: OVB-organoids""" "Ods011024","GSE179438","GSM5418084","Forebrain","RNA-Seq","Homo sapiens","34407456","""cell type source: Normal lung fibroblast IMR90 derived organoids""_""cell subtype: OVB-organoids""" "Ods011027","GSE179439","GSM5418087","Brain","RNA-Seq","Homo sapiens","34496239","""cell line: U3047MG""_""cell type: glioblastoma patient-derived GSC line""_""genotype/variation: Control""" "Ods011028","GSE179439","GSM5418088","Brain","RNA-Seq","Homo sapiens","34496239","""cell line: U3047MG""_""cell type: glioblastoma patient-derived GSC line""_""genotype/variation: Control""" "Ods011116","GSE181405","GSM5501779","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 17""_""replicate: 1""" "Ods011117","GSE181405","GSM5501780","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 17""_""replicate: 2""" "Ods011118","GSE181405","GSM5501781","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 17""_""replicate: 3""" "Ods011119","GSE181405","GSM5501782","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 23""_""replicate: 1""" "Ods011120","GSE181405","GSM5501783","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 23""_""replicate: 2""" "Ods011121","GSE181405","GSM5501784","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 23""_""replicate: 3""" "Ods011122","GSE181405","GSM5501785","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 40""_""replicate: 1""" "Ods011123","GSE181405","GSM5501786","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 40""_""replicate: 2""" "Ods011124","GSE181405","GSM5501787","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 40""_""replicate: 3""" "Ods011125","GSE181405","GSM5501788","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 70""_""replicate: 1""" "Ods011126","GSE181405","GSM5501789","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 70""_""replicate: 2""" "Ods011127","GSE181405","GSM5501790","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 70""_""replicate: 3""" "Ods011128","GSE181405","GSM5501791","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 120""_""replicate: 1""" "Ods011129","GSE181405","GSM5501792","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 120""_""replicate: 2""" "Ods011130","GSE181405","GSM5501793","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 120""_""replicate: 3""" "Ods011131","GSE181405","GSM5501794","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 140""_""replicate: 1""" "Ods011132","GSE181405","GSM5501795","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 140""_""replicate: 2""" "Ods011133","GSE181405","GSM5501796","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 140""_""replicate: 3""" "Ods011134","GSE181405","GSM5501797","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 158""_""replicate: 1""" "Ods011135","GSE181405","GSM5501798","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 158""_""replicate: 2""" "Ods011136","GSE181405","GSM5501799","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: brain organoid""_""age (in days): 158""_""replicate: 3""" "Ods011161","GSE181514","GSM5504122","Intestine","RNA-Seq","Homo sapiens","34535662","""genotype: Wildtype""_""tissue: Intestine""_""culture method: differentiation medium""" "Ods011162","GSE181514","GSM5504123","Intestine","RNA-Seq","Homo sapiens","34535662","""genotype: Wildtype""_""tissue: Intestine""_""culture method: differentiation medium""" "Ods011163","GSE181514","GSM5504124","Intestine","RNA-Seq","Homo sapiens","34535662","""genotype: Wildtype""_""tissue: Intestine""_""culture method: expansion medium""" "Ods011164","GSE181514","GSM5504125","Intestine","RNA-Seq","Homo sapiens","34535662","""genotype: Wildtype""_""tissue: Intestine""_""culture method: expansion medium""" "Ods011165","GSE181514","GSM5504126","Nasal airway","RNA-Seq","Homo sapiens","34535662","""genotype: Wildtype""_""tissue: Nasal epithelium""_""culture method: expansion medium""" "Ods011166","GSE181514","GSM5504127","Nasal airway","RNA-Seq","Homo sapiens","34535662","""genotype: Wildtype""_""tissue: Nasal epithelium""_""culture method: expansion medium""" "Ods011167","GSE181514","GSM5504128","Nasal airway","RNA-Seq","Homo sapiens","34535662","""genotype: Wildtype""_""tissue: Nasal epithelium""_""culture method: differentiation medium""" "Ods011168","GSE181514","GSM5504129","Nasal airway","RNA-Seq","Homo sapiens","34535662","""genotype: Wildtype""_""tissue: Nasal epithelium""_""culture method: differentiation medium""" "Ods011238","GSE184390","GSM5585693","Stomach","RNA-Seq","Homo sapiens",NA,"""cell type: Cultured organoid (RP-Gos) from adult stomach tissue (age 45 year)""_""passage: P5""_""sars-cov-2 infection: negative paired control""" "Ods011239","GSE184390","GSM5585694","Stomach","RNA-Seq","Homo sapiens",NA,"""cell type: Cultured organoid (RP-Gos) from adult stomach tissue (age 45 year)""_""passage: P5""_""sars-cov-2 infection: negative paired control""" "Ods011240","GSE184390","GSM5585695","Stomach","RNA-Seq","Homo sapiens",NA,"""cell type: Cultured organoid (RP-Gos) from adult stomach tissue (age 45 year)""_""passage: P5""_""sars-cov-2 infection: negative paired control""" "Ods011241","GSE184390","GSM5585696","Stomach","RNA-Seq","Homo sapiens",NA,"""cell type: Cultured organoid (RP-Gos) from adult stomach tissue (age 45 year)""_""passage: P5""_""sars-cov-2 infection: negative paired control""" "Ods011481","GSE52194","GSM1261033","Breast","RNA-Seq","Homo sapiens","22355776|23604310|23884293","""tumor type: Normal Breast Organoids""" "Ods011482","GSE52194","GSM1261034","Breast","RNA-Seq","Homo sapiens","22355776|23604310|23884293","""tumor type: Normal Breast Organoids""" "Ods011483","GSE52194","GSM1261035","Breast","RNA-Seq","Homo sapiens","22355776|23604310|23884293","""tumor type: Normal Breast Organoids""" "Ods011666","GSE61476","GSM1505821","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 31""_""donor id: 03-04""" "Ods011667","GSE61476","GSM1505822","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 0""_""donor id: 1123-01""" "Ods011668","GSE61476","GSM1505823","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: female""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 0""_""donor id: 1123-02""" "Ods011670","GSE61476","GSM1505825","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 11""_""donor id: 1123-01""" "Ods011671","GSE61476","GSM1505826","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: female""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 11""_""donor id: 1123-02""" "Ods011673","GSE61476","GSM1505828","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: female""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 11""_""donor id: 07-02""" "Ods011676","GSE61476","GSM1505831","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: female""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 31""_""donor id: 07-02""" "Ods011679","GSE61476","GSM1505834","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 31""_""donor id: 1123-01""" "Ods011680","GSE61476","GSM1505835","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: female""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 31""_""donor id: 1123-02""" "Ods011682","GSE61476","GSM1505837","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 0""_""donor id: 03-04""" "Ods011685","GSE61476","GSM1505840","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 11""_""donor id: 03-01""" "Ods011686","GSE61476","GSM1505841","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 31""_""donor id: 03-01""" "Ods011687","GSE61476","GSM1505842","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: female""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 11""_""donor id: 03-02""" "Ods011688","GSE61476","GSM1505843","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: female""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 31""_""donor id: 03-02""" "Ods011691","GSE61476","GSM1505846","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 11""_""donor id: 03-04""" "Ods011692","GSE61476","GSM1505847","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 31""_""donor id: 03-04""" "Ods011693","GSE61476","GSM1505848","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 11""_""donor id: 07-01""" "Ods011694","GSE61476","GSM1505849","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 31""_""donor id: 07-01""" "Ods011695","GSE61476","GSM1505850","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 31""_""donor id: 07-01""" "Ods011696","GSE61476","GSM1505851","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: female""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 31""_""donor id: 07-02""" "Ods011699","GSE61476","GSM1505854","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 11""_""donor id: 1120-01""" "Ods011700","GSE61476","GSM1505855","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 11""_""donor id: 1120-01""" "Ods011701","GSE61476","GSM1505856","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 31""_""donor id: 1120-01""" "Ods011702","GSE61476","GSM1505857","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 31""_""donor id: 1120-01""" "Ods011705","GSE61476","GSM1505860","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 11""_""donor id: 1123-01""" "Ods011706","GSE61476","GSM1505861","Brain","RNA-Seq","Homo sapiens","26186191","""donor's disease state: unaffected""_""donor's gender: male""_""cell type: iPSC-derived neural progenitors""_""number of days in vitro in terminal differentiation conditions: 31""_""donor id: 1123-01""" "Ods011745","GSE62784","GSM1533369","Stomach","RNA-Seq","Mus musculus","25500896","""genotype: Control""_""tissue: Stomach organoids""" "Ods011747","GSE62784","GSM1533371","Stomach","RNA-Seq","Mus musculus","25500896","""genotype: Control""_""tissue: Stomach organoids""" "Ods011748","GSE62784","GSM1533372","Small intestine","RNA-Seq","Mus musculus","25500896","""genotype: Cdx2 null""_""tissue: small intestine organoids""" "Ods011749","GSE62784","GSM1533373","Small intestine","RNA-Seq","Mus musculus","25500896","""genotype: Control""_""tissue: small intestine organoids""" "Ods011750","GSE62784","GSM1533374","Small intestine","RNA-Seq","Mus musculus","25500896","""genotype: Cdx2 null""_""tissue: small intestine organoids""" "Ods011751","GSE62784","GSM1533375","Small intestine","RNA-Seq","Mus musculus","25500896","""genotype: Control""_""tissue: small intestine organoids""" "Ods011752","GSE62784","GSM1533376","Small intestine","RNA-Seq","Mus musculus","25500896","""genotype: Cdx2 null""_""tissue: small intestine organoids""" "Ods011754","GSE62784","GSM1533378","Stomach","RNA-Seq","Mus musculus","25500896","""genotype: Control""_""tissue: Stomach organoids""" "Ods011755","GSE62784","GSM1533379","Small intestine","RNA-Seq","Mus musculus","25500896","""genotype: Control""_""tissue: small intestine organoids""" "Ods011756","GSE62784","GSM1533380","Small intestine","RNA-Seq","Mus musculus","25500896","""genotype: Cdx2 null""_""tissue: small intestine organoids""" "Ods011758","GSE62784","GSM1533382","Small intestine","RNA-Seq","Mus musculus","25500896","""genotype: Control""_""tissue: small intestine organoids""" "Ods011759","GSE62784","GSM1533383","Stomach","RNA-Seq","Mus musculus","25500896","""genotype: Control""_""tissue: Stomach organoids""" "Ods011764","GSE63348","GSM1546444","Pancreatic duct","RNA-Seq","Mus musculus","25557080","""mouse background: C57B6/J""_""mouse genotype: wild-type""_""tissue origin: pancreatic ducts from histologically confirmed normal pancreas""_""Sex: female""" "Ods011765","GSE63348","GSM1546445","Pancreatic duct","RNA-Seq","Mus musculus","25557080","""mouse background: C57B6/J""_""mouse genotype: wild-type""_""tissue origin: pancreatic ducts from histologically confirmed normal pancreas""_""Sex: female""" "Ods011766","GSE63348","GSM1546446","Pancreatic duct","RNA-Seq","Mus musculus","25557080","""mouse background: C57B6/J""_""mouse genotype: wild-type""_""tissue origin: pancreatic ducts from histologically confirmed normal pancreas""_""Sex: male""" "Ods011767","GSE63348","GSM1546447","Pancreatic duct","RNA-Seq","Mus musculus","25557080","""mouse background: C57B6/J""_""mouse genotype: wild-type""_""tissue origin: pancreatic ducts from histologically confirmed normal pancreas""_""Sex: male""" "Ods011768","GSE63348","GSM1546448","Pancreatic duct","RNA-Seq","Mus musculus","25557080","""mouse background: C57B6/J""_""mouse genotype: wild-type""_""tissue origin: pancreatic ducts from histologically confirmed normal pancreas""_""Sex: female""" "Ods011769","GSE63348","GSM1546449","Pancreatic duct","RNA-Seq","Mus musculus","25557080","""mouse background: C57B6/J""_""mouse genotype: wild-type""_""tissue origin: pancreatic ducts from histologically confirmed normal pancreas""_""Sex: female""" "Ods011770","GSE63348","GSM1546450","Pancreatic duct","RNA-Seq","Mus musculus","25557080","""mouse background: C57B6/J""_""mouse genotype: wild-type""_""tissue origin: pancreatic ducts from histologically confirmed normal pancreas""_""Sex: female""" "Ods011948","GSE65395","GSM1900646","Small intestine","RNA-Seq","Mus musculus","26989172","""strain background: mixed""_""developemental stage/age: E15.5 embryo""_""tissue: small intestine""_""cell type: ex vivo organoids""_""passages: Passage 4 day 5""" "Ods011949","GSE65395","GSM1900647","Small intestine","RNA-Seq","Mus musculus","26989172","""strain background: mixed""_""developemental stage/age: Adult (3 month-old)""_""tissue: small intestine""_""cell type: ex vivo organoids""_""passages: Passage 1 day 5""" "Ods011982","GSE69994","GSM1695870","Mammary epithelium","RNA-Seq","Homo sapiens","26249178","""tissue: normal breast epithelial organoid""_""age: 44""_""race: White""" "Ods011983","GSE69994","GSM1695871","Mammary epithelium","RNA-Seq","Homo sapiens","26249178","""tissue: normal breast epithelial organoid""_""age: 19""_""race: Black""" "Ods011984","GSE69994","GSM1695872","Mammary epithelium","RNA-Seq","Homo sapiens","26249178","""tissue: normal breast epithelial organoid""_""age: 35""_""race: White""" "Ods011985","GSE69994","GSM1695873","Mammary epithelium","RNA-Seq","Homo sapiens","26249178","""tissue: normal breast epithelial organoid""_""age: 44""_""race: White""" "Ods011986","GSE69994","GSM1695874","Mammary epithelium","RNA-Seq","Homo sapiens","26249178","""tissue: normal breast epithelial organoid""_""age: 37""_""race: White""" "Ods011987","GSE69994","GSM1695875","Mammary epithelium","RNA-Seq","Homo sapiens","26249178","""tissue: normal breast epithelial organoid""_""age: 43""_""race: Black""" "Ods011988","GSE69994","GSM1695876","Mammary epithelium","RNA-Seq","Homo sapiens","26249178","""tissue: normal breast epithelial organoid""_""age: 20""_""race: Black""" "Ods011989","GSE69994","GSM1695877","Mammary epithelium","RNA-Seq","Homo sapiens","26249178","""tissue: normal breast epithelial organoid""_""age: 38""_""race: White""" "Ods011990","GSE69994","GSM1695878","Mammary epithelium","RNA-Seq","Homo sapiens","26249178","""tissue: normal breast epithelial organoid""_""age: 34""_""race: White""" "Ods011991","GSE69994","GSM1695879","Mammary epithelium","RNA-Seq","Homo sapiens","26249178","""tissue: normal breast epithelial organoid""_""age: 28""_""race: White""" "Ods012243","GSE80073","GSM2112653","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 26 days from the beginning of organoid culture""" "Ods012244","GSE80073","GSM2112654","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 26 days from the beginning of organoid culture""" "Ods012245","GSE80073","GSM2112655","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 26 days from the beginning of organoid culture""" "Ods012246","GSE80073","GSM2112656","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 26 days from the beginning of organoid culture""" "Ods012247","GSE80073","GSM2112657","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 26 days from the beginning of organoid culture""" "Ods012248","GSE80073","GSM2112658","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 26 days from the beginning of organoid culture""" "Ods012249","GSE80073","GSM2112659","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 40 days from the beginning of organoid culture""" "Ods012250","GSE80073","GSM2112660","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 40 days from the beginning of organoid culture""" "Ods012251","GSE80073","GSM2112661","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 40 days from the beginning of organoid culture""" "Ods012252","GSE80073","GSM2112662","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 40 days from the beginning of organoid culture""" "Ods012253","GSE80073","GSM2112663","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 40 days from the beginning of organoid culture""" "Ods012254","GSE80073","GSM2112664","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 40 days from the beginning of organoid culture""" "Ods012255","GSE80073","GSM2112665","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 54 days from the beginning of organoid culture""" "Ods012256","GSE80073","GSM2112666","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 54 days from the beginning of organoid culture""" "Ods012257","GSE80073","GSM2112667","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 54 days from the beginning of organoid culture""" "Ods012258","GSE80073","GSM2112668","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 54 days from the beginning of organoid culture""" "Ods012259","GSE80073","GSM2112669","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 54 days from the beginning of organoid culture""" "Ods012260","GSE80073","GSM2112670","Brain","RNA-Seq","Homo sapiens","27118425","""organoid culture: cerebral organoids""_""time: 54 days from the beginning of organoid culture""" "Ods012299","GSE80636","GSM2132036","Small intestine","RNA-Seq","Mus musculus","27939219","""strain: Bl/6""_""tissue: Small intestine""" "Ods012300","GSE80636","GSM2132037","Small intestine","RNA-Seq","Mus musculus","27939219","""strain: Bl/6""_""tissue: Small intestine""" "Ods012301","GSE80636","GSM2358985","Small intestine","RNA-Seq","Mus musculus","27939219","""strain: Bl/6""_""tissue: Small intestine""" "Ods012302","GSE80636","GSM2358986","Small intestine","RNA-Seq","Mus musculus","27939219","""strain: Bl/6""_""tissue: Small intestine""" "Ods012303","GSE80636","GSM2358987","Small intestine","RNA-Seq","Mus musculus","27939219","""strain: Bl/6""_""tissue: Small intestine""" "Ods012319","GSE80636","GSM2359003","Small intestine","RNA-Seq","Mus musculus","27939219","""strain: Bl/6""_""tissue: Small intestine""" "Ods012320","GSE80636","GSM2359004","Small intestine","RNA-Seq","Mus musculus","27939219","""strain: Bl/6""_""tissue: Small intestine""" "Ods012321","GSE80636","GSM2359005","Small intestine","RNA-Seq","Mus musculus","27939219","""strain: Bl/6""_""tissue: Small intestine""" "Ods012461","GSE84989","GSM2255592","Intestine","RNA-Seq","Mus musculus","27561422","""strain: C57BL/6""_""cell type: Intestinal stem cells""_""treatment: none""_""passages: 2""" "Ods012462","GSE84989","GSM2255593","Intestine","RNA-Seq","Mus musculus","27561422","""strain: C57BL/6""_""cell type: Intestinal stem cells""_""treatment: none""_""passages: 2""" "Ods012463","GSE84989","GSM2255594","Intestine","RNA-Seq","Mus musculus","27561422","""strain: C57BL/6""_""cell type: Intestinal stem cells""_""treatment: none""_""passages: 2""" "Ods012467","GSE84989","GSM2255598","Intestine","RNA-Seq","Mus musculus","27561422","""strain: C57BL/6""_""cell type: Intestinal stem cells""_""treatment: none""_""passages: 2""" "Ods012468","GSE84989","GSM2255599","Intestine","RNA-Seq","Mus musculus","27561422","""strain: C57BL/6""_""cell type: Intestinal stem cells""_""treatment: none""_""passages: 2""" "Ods012469","GSE84989","GSM2255600","Intestine","RNA-Seq","Mus musculus","27561422","""strain: C57BL/6""_""cell type: Intestinal stem cells""_""treatment: none""_""passages: 2""" "Ods012473","GSE85223","GSM2262394","Liver","RNA-Seq","Homo sapiens","28275009","""cell population: Liver bud""_""time: day 0""" "Ods012474","GSE85223","GSM2262395","Liver","RNA-Seq","Homo sapiens","28275009","""cell population: Liver bud""_""time: day 0""" "Ods012475","GSE85223","GSM2262396","Liver","RNA-Seq","Homo sapiens","28275009","""cell population: Liver bud""_""time: day 0""" "Ods012476","GSE85223","GSM2262397","Liver","RNA-Seq","Homo sapiens","28275009","""cell population: Liver bud""_""time: day 2""" "Ods012477","GSE85223","GSM2262398","Liver","RNA-Seq","Homo sapiens","28275009","""cell population: Liver bud""_""time: day 2""" "Ods012478","GSE85223","GSM2262399","Liver","RNA-Seq","Homo sapiens","28275009","""cell population: Liver bud""_""time: day 2""" "Ods012479","GSE85223","GSM2262400","Liver","RNA-Seq","Homo sapiens","28275009","""cell population: Liver bud""_""time: day 4""" "Ods012480","GSE85223","GSM2262401","Liver","RNA-Seq","Homo sapiens","28275009","""cell population: Liver bud""_""time: day 4""" "Ods012481","GSE85223","GSM2262402","Liver","RNA-Seq","Homo sapiens","28275009","""cell population: Liver bud""_""time: day 4""" "Ods012482","GSE85223","GSM2262403","Liver","RNA-Seq","Homo sapiens","28275009","""cell population: Liver bud""_""time: day 6""" "Ods012483","GSE85223","GSM2262404","Liver","RNA-Seq","Homo sapiens","28275009","""cell population: Liver bud""_""time: day 6""" "Ods012484","GSE85223","GSM2262405","Liver","RNA-Seq","Homo sapiens","28275009","""cell population: Liver bud""_""time: day 6""" "Ods013212","GSE94583","GSM2478860","Liver","RNA-Seq","Mus musculus","29248454","""sample type: organoids""_""condition: normal organoids""" "Ods013213","GSE94583","GSM2478861","Liver","RNA-Seq","Mus musculus","29248454","""sample type: organoids""_""condition: normal organoids""" "Ods013214","GSE94583","GSM2478862","Liver","RNA-Seq","Mus musculus","29248454","""sample type: organoids""_""condition: normal organoids""" "Ods013215","GSE94583","GSM2478864","Liver","RNA-Seq","Mus musculus","29248454","""sample type: organoids""_""condition: normal organoids""" "Ods013216","GSE94583","GSM2478865","Liver","RNA-Seq","Mus musculus","29248454","""sample type: organoids""_""condition: normal organoids""" "Ods013217","GSE94583","GSM2478866","Liver","RNA-Seq","Mus musculus","29248454","""sample type: organoids""_""condition: normal organoids""" "Ods013359","GSE97882","GSM2579555","Cerebral cortex","RNA-Seq","Homo sapiens","28757360","""tissue: human cortex organoids""_""status: differentiated""" "Ods013361","GSE97882","GSM2579557","Cerebral cortex","RNA-Seq","Homo sapiens","28757360","""tissue: human cortex organoids""_""status: differentiated""" "Ods013490","GSE99317","GSM2641041","Intestine","RNA-Seq","Homo sapiens","28803915","""cell type: HESC-derived human intestinal organoids""" "Ods013491","GSE99317","GSM2641042","Intestine","RNA-Seq","Homo sapiens","28803915","""cell type: HESC-derived human intestinal organoids""" "Ods013492","GSE99317","GSM2641043","Intestine","RNA-Seq","Homo sapiens","28803915","""cell type: HESC-derived human intestinal organoids""" "Ods013518","GSE99582","GSM2648044","Proximal tubules","RNA-Seq","Homo sapiens","30573816","""clone: human iPSC line CRL1502 (clone C32)""_""cell type: Proximal tubules from hiPSCs-derived kidney organoid (25 days differentiation)""" "Ods013519","GSE99582","GSM2648045","Proximal tubules","RNA-Seq","Homo sapiens","30573816","""clone: human iPSC line CRL1502 (clone C32)""_""cell type: Proximal tubules from hiPSCs-derived kidney organoid (25 days differentiation)""" "Ods013520","GSE99582","GSM2648046","Proximal tubules","RNA-Seq","Homo sapiens","30573816","""clone: human iPSC line CRL1502 (clone C32)""_""cell type: Proximal tubules from hiPSCs-derived kidney organoid (25 days differentiation)""" "Ods013665","GSE184091","GSM5577609","Salivary gland","RNA-Seq","Mus musculus",NA,"""background strain: C57BL/6""_""tissue: submandibular gland organoid""_""genotype: wild-type""_""treatment: cultured in growth media""" "Ods013666","GSE184091","GSM5577610","Salivary gland","RNA-Seq","Mus musculus",NA,"""background strain: C57BL/6""_""tissue: submandibular gland organoid""_""genotype: wild-type""_""treatment: cultured in growth media""" "Ods013667","GSE184091","GSM5577611","Salivary gland","RNA-Seq","Mus musculus",NA,"""background strain: C57BL/6""_""tissue: parotid gland organoid""_""genotype: wild-type""_""treatment: cultured in differentiation media""" "Ods013668","GSE184091","GSM5577612","Salivary gland","RNA-Seq","Mus musculus",NA,"""background strain: C57BL/6""_""tissue: parotid gland organoid""_""genotype: wild-type""_""treatment: cultured in differentiation media""" "Ods013669","GSE184091","GSM5577613","Salivary gland","RNA-Seq","Mus musculus",NA,"""background strain: C57BL/6""_""tissue: submandibular gland organoid""_""genotype: wild-type""_""treatment: cultured in differentiation media""" "Ods013670","GSE184091","GSM5577614","Salivary gland","RNA-Seq","Mus musculus",NA,"""background strain: C57BL/6""_""tissue: submandibular gland organoid""_""genotype: wild-type""_""treatment: cultured in differentiation media""" "Ods013671","GSE184091","GSM5577615","Salivary gland","RNA-Seq","Mus musculus",NA,"""background strain: C57BL/6""_""tissue: sublingual gland organoid""_""genotype: wild-type""_""treatment: cultured in differentiation media""" "Ods013672","GSE184091","GSM5577616","Salivary gland","RNA-Seq","Mus musculus",NA,"""background strain: C57BL/6""_""tissue: sublingual gland organoid""_""genotype: wild-type""_""treatment: cultured in differentiation media""" "Ods013689","GSE198844","GSM5957794","Ureter","scRNA-Seq","Homo sapiens",NA,"""cell type: hUC-derived 3D renal organoids""" "Ods013706","GSE202308","GSM6108256","Embryo","scRNA-Seq","Homo sapiens",NA,"""cell type: Induced pluripotent stem cells (hiPSCs)""_""time point: day 7""" "Ods013850","GSE142116","GSM4221121","Colon","scRNA-Seq","Homo sapiens","32217638","""culture condition: Standard colon organoid medium""_""tissue: colon normal organoid""_""""" "Ods013987","GSE160264","GSM4226856","Gastric","RNA-Seq","Mus musculus","34969824","""tissue: Mouse gastric organoids""_""strain: C57BL/6""_""""_""""" "Ods013988","GSE160264","GSM4226857","Gastric","RNA-Seq","Mus musculus","34969824","""tissue: Mouse gastric organoids""_""strain: C57BL/6""_""""_""""" "Ods013989","GSE160264","GSM4226858","Gastric","RNA-Seq","Mus musculus","34969824","""tissue: Mouse gastric organoids""_""strain: C57BL/6""_""""_""""" "Ods013990","GSE160264","GSM4226859","Gastric","RNA-Seq","Mus musculus","34969824","""tissue: Mouse gastric organoids""_""strain: C57BL/6""_""""_""""" "Ods013991","GSE160264","GSM4226860","Gastric","RNA-Seq","Mus musculus","34969824","""tissue: Mouse gastric organoids""_""strain: C57BL/6""_""""_""""" "Ods013992","GSE160264","GSM4226861","Gastric","RNA-Seq","Mus musculus","34969824","""tissue: Mouse gastric organoids""_""strain: C57BL/6""_""""_""""" "Ods013993","GSE160264","GSM4226862","Gastric","RNA-Seq","Mus musculus","34969824","""tissue: Mouse gastric organoids""_""strain: C57BL/6""_""""_""""" "Ods013994","GSE160264","GSM4226863","Gastric","RNA-Seq","Mus musculus","34969824","""tissue: Mouse gastric organoids""_""strain: C57BL/6""_""""_""""" "Ods013995","GSE160264","GSM4226864","Gastric","RNA-Seq","Mus musculus","34969824","""tissue: Mouse gastric organoids""_""strain: C57BL/6""_""""_""""" "Ods013996","GSE160264","GSM4226865","Small intestine","RNA-Seq","Mus musculus","34969824","""tissue: Mouse small intestine organoids""_""strain: C57BL/6""_""""_""""" "Ods013997","GSE160264","GSM4226866","Small intestine","RNA-Seq","Mus musculus","34969824","""tissue: Mouse small intestine organoids""_""strain: C57BL/6""_""""_""""" "Ods014062","GSE163142","GSM4972514","Small intestine","RNA-Seq","Mus musculus","34877501","""cell line: line26 wild type""_""cell type: mouse small intestinal organoid""_""genotype/variation: wild type""_""treatment: DMSO""" "Ods014070","GSE163698","GSM4984050","Lung","scRNA-Seq","Homo sapiens",NA,"""tissue: lung organoids""_""cell type: Alveolar and airway tissue""_""cell line: RUES2""" "Ods014083","GSE165309","GSM5030016","Small intestine","RNA-Seq","Mus musculus",NA,"""tissue: -""_""cell type: small intestinal organoids""_""strain: C57BL/6""" "Ods014084","GSE165309","GSM5030017","Small intestine","RNA-Seq","Mus musculus",NA,"""tissue: -""_""cell type: small intestinal organoids""_""strain: C57BL/6""" "Ods014085","GSE165309","GSM5030018","Small intestine","RNA-Seq","Mus musculus",NA,"""tissue: -""_""cell type: small intestinal organoids""_""strain: C57BL/6""" "Ods014086","GSE165309","GSM5030019","Small intestine","RNA-Seq","Mus musculus",NA,"""tissue: -""_""cell type: small intestinal organoids""_""strain: C57BL/6""" "Ods014087","GSE165309","GSM5030020","Small intestine","RNA-Seq","Mus musculus",NA,"""tissue: -""_""cell type: small intestinal organoids""_""strain: C57BL/6""" "Ods014088","GSE165309","GSM5030021","Small intestine","RNA-Seq","Mus musculus",NA,"""tissue: -""_""cell type: small intestinal organoids""_""strain: C57BL/6""" "Ods014089","GSE165309","GSM5030025","Stomach","RNA-Seq","Mus musculus",NA,"""tissue: -""_""cell type: gastric organoids""_""strain: C57BL/6""" "Ods014090","GSE165309","GSM5030026","Stomach","RNA-Seq","Mus musculus",NA,"""tissue: -""_""cell type: gastric organoids""_""strain: C57BL/6""" "Ods014091","GSE165309","GSM5030027","Stomach","RNA-Seq","Mus musculus",NA,"""tissue: -""_""cell type: gastric organoids""_""strain: C57BL/6""" "Ods014092","GSE165309","GSM5030028","Stomach","RNA-Seq","Mus musculus",NA,"""tissue: -""_""cell type: gastric organoids""_""strain: C57BL/6""" "Ods014093","GSE165309","GSM5030029","Stomach","RNA-Seq","Mus musculus",NA,"""tissue: -""_""cell type: gastric organoids""_""strain: C57BL/6""" "Ods014094","GSE165309","GSM5030030","Stomach","RNA-Seq","Mus musculus",NA,"""tissue: -""_""cell type: gastric organoids""_""strain: C57BL/6""" "Ods014112","GSE167409","GSM5104879","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: h9ESC derived cortical organoids""_""chip antibody: NA""_""genotype: WT""" "Ods014113","GSE167409","GSM5104880","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: h9ESC derived cortical organoids""_""chip antibody: NA""_""genotype: WT""" "Ods014114","GSE167409","GSM5104881","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: h9ESC derived cortical organoids""_""chip antibody: NA""_""genotype: WT""" "Ods014121","GSE167409","GSM5693835","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: h9ESC derived cortical organoids""_""chip antibody: NA""_""genotype: WT""" "Ods014122","GSE167409","GSM5693836","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: h9ESC derived cortical organoids""_""chip antibody: NA""_""genotype: WT""" "Ods014123","GSE167409","GSM5693837","Cerebral cortex","RNA-Seq","Homo sapiens",NA,"""cell type: h9ESC derived cortical organoids""_""chip antibody: NA""_""genotype: WT""" "Ods014336","GSE174577","GSM5320047","Esophagus","scRNA-Seq","Mus musculus","34877497","""tissue: Mouse esopahgus-derived organoid""_""cell type: epithelia cells""_""strain: C57BL/6""_""day: Day 8""" "Ods014374","GSE178148","GSM5380958","Duodenum","RNA-Seq","Mus musculus","35169122","""development stage: adult stage""_""cell type: stem cells""_""genotype: wild type""_""treatment: none""_""tissue: epithelium""" "Ods014375","GSE178148","GSM5380959","Duodenum","RNA-Seq","Mus musculus","35169122","""development stage: adult stage""_""cell type: stem cells""_""genotype: wild type""_""treatment: none""_""tissue: epithelium""" "Ods014376","GSE178148","GSM5380960","Duodenum","RNA-Seq","Mus musculus","35169122","""development stage: adult stage""_""cell type: stem cells""_""genotype: wild type""_""treatment: none""_""tissue: epithelium""" "Ods014377","GSE178148","GSM5380961","Duodenum","RNA-Seq","Mus musculus","35169122","""development stage: adult stage""_""cell type: stem cells""_""genotype: wild type""_""treatment: none""_""tissue: epithelium""" "Ods014396","GSE178263","GSM5386059","Kidney","scRNA-Seq","Mus musculus","35105870","""strain: C57BL/6Jx129""_""tissue: ES cell-derived kidney organoids""_""genotype: Wild type""_""""" "Ods014401","GSE179130","GSM5410316","Colon","RNA-Seq","Homo sapiens","34284165","""applied mechanostimulation: N/A""_""cell type: Biopsy-derived colonoids""_""air liquid interface: N/A""" "Ods014402","GSE179130","GSM5410317","Colon","RNA-Seq","Homo sapiens","34284165","""applied mechanostimulation: N/A""_""cell type: Biopsy-derived colonoids""_""air liquid interface: N/A""" "Ods014403","GSE179130","GSM5410318","Colon","RNA-Seq","Homo sapiens","34284165","""applied mechanostimulation: N/A""_""cell type: Biopsy-derived colonoids""_""air liquid interface: N/A""" "Ods014449","GSE179482","GSM5418883","Colon","RNA-Seq","Mus musculus",NA,"""genotype: Wild type""_""treatment: DMSO for 4 hours""_""tissue: Colon""_""sample type: Organoids""" "Ods014450","GSE179482","GSM5418884","Colon","RNA-Seq","Mus musculus",NA,"""genotype: Wild type""_""treatment: DMSO for 4 hours""_""tissue: Colon""_""sample type: Organoids""" "Ods014533","GSE181430","GSM5771829","Fetal salivary gland","scRNA-Seq","Mus musculus","35224622","""strain: CD-1""_""tissue: Salivary Gland""_""age: Embryonic_day_16+7""" "Ods014588","GSE182426","GSM5529031","Colon","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Colon""_""sample type: Colonoid""_""format: Monolayer""_""substrate: Collagen IV""_""treatment: Mock treated""_""individual: Patient-C3""" "Ods014594","GSE182426","GSM5529037","Colon","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Colon""_""sample type: Colonoid""_""format: Monolayer""_""substrate: Collagen IV""_""treatment: Mock treated""_""individual: Patient-C4""" "Ods014600","GSE182426","GSM5529043","Colon","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Colon""_""sample type: Colonoid""_""format: Monolayer""_""substrate: Collagen IV""_""treatment: Mock treated""_""individual: Patient-C9""" "Ods014603","GSE182426","GSM5529046","Duodenum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Duodenum""_""sample type: Duodenal Enteroid""_""format: Monolayer""_""substrate: Collagen IV""_""treatment: Mock treated""_""individual: Patient-D103""" "Ods014612","GSE182426","GSM5529055","Duodenum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Duodenum""_""sample type: Duodenal Enteroid""_""format: Monolayer""_""substrate: Collagen IV""_""treatment: Mock treated""_""individual: Patient-D4""" "Ods014618","GSE182426","GSM5529061","Duodenum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Duodenum""_""sample type: Duodenal Enteroid""_""format: Monolayer""_""substrate: Collagen IV""_""treatment: Mock treated""_""individual: Patient-D9""" "Ods014622","GSE182426","GSM5529065","Ileum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Ileum""_""sample type: Ileal Enteroid""_""format: Monolayer""_""substrate: Collagen IV""_""treatment: Mock treated""_""individual: Patient-I103""" "Ods014630","GSE182426","GSM5529073","Ileum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Ileum""_""sample type: Ileal Enteroid""_""format: Monolayer""_""substrate: Collagen IV""_""treatment: Mock treated""_""individual: Patient-I4""" "Ods014641","GSE182426","GSM5529084","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""sample type: Jejunal Enteroid""_""format: Monolayer""_""substrate: Collagen IV""_""treatment: Mock treated""_""individual: Patient-J11""" "Ods014647","GSE182426","GSM5529090","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""sample type: Jejunal Enteroid""_""format: Monolayer""_""substrate: Collagen IV""_""treatment: Mock treated""_""individual: Patient-J2""" "Ods014653","GSE182426","GSM5529096","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""sample type: Jejunal Enteroid""_""format: Monolayer""_""substrate: Collagen IV""_""treatment: Mock treated""_""individual: Patient-J3""" "Ods014654","GSE182437","GSM5529225","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J2""_""format: 3D""_""substrate: Matrigel""_""sample type: Differentiated Jejunal Enteroids""" "Ods014655","GSE182437","GSM5529226","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J3""_""format: 3D""_""substrate: Matrigel""_""sample type: Differentiated Jejunal Enteroids""" "Ods014656","GSE182437","GSM5529227","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J4""_""format: 3D""_""substrate: Matrigel""_""sample type: Differentiated Jejunal Enteroids""" "Ods014657","GSE182437","GSM5529228","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J11""_""format: 3D""_""substrate: Matrigel""_""sample type: Differentiated Jejunal Enteroids""" "Ods014658","GSE182437","GSM5529229","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J2""_""format: Transwell""_""substrate: Collagen""_""sample type: Differentiated Jejunal Enteroids""" "Ods014659","GSE182437","GSM5529230","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J3""_""format: Transwell""_""substrate: Collagen""_""sample type: Differentiated Jejunal Enteroids""" "Ods014660","GSE182437","GSM5529231","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J4""_""format: Transwell""_""substrate: Collagen""_""sample type: Differentiated Jejunal Enteroids""" "Ods014661","GSE182437","GSM5529232","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J6""_""format: Transwell""_""substrate: Collagen""_""sample type: Differentiated Jejunal Enteroids""" "Ods014662","GSE182437","GSM5529233","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J11""_""format: Transwell""_""substrate: Collagen""_""sample type: Differentiated Jejunal Enteroids""" "Ods014663","GSE182437","GSM5529234","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J2""_""format: Transwell""_""substrate: Matrigel""_""sample type: Differentiated Jejunal Enteroids""" "Ods014664","GSE182437","GSM5529235","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J3""_""format: Transwell""_""substrate: Matrigel""_""sample type: Differentiated Jejunal Enteroids""" "Ods014665","GSE182437","GSM5529236","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J4""_""format: Transwell""_""substrate: Matrigel""_""sample type: Differentiated Jejunal Enteroids""" "Ods014666","GSE182437","GSM5529237","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J6""_""format: Transwell""_""substrate: Matrigel""_""sample type: Differentiated Jejunal Enteroids""" "Ods014667","GSE182437","GSM5529238","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J11""_""format: Transwell""_""substrate: Matrigel""_""sample type: Differentiated Jejunal Enteroids""" "Ods014668","GSE182437","GSM5529239","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J6""_""format: 3D""_""substrate: Matrigel""_""sample type: Differentiated Jejunal Enteroids""" "Ods014669","GSE182437","GSM5529240","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J2""_""format: Monolayer""_""substrate: Collagen""_""sample type: Differentiated Jejunal Enteroids""" "Ods014670","GSE182437","GSM5529241","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J3""_""format: Monolayer""_""substrate: Collagen""_""sample type: Differentiated Jejunal Enteroids""" "Ods014671","GSE182437","GSM5529242","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J4""_""format: Monolayer""_""substrate: Collagen""_""sample type: Differentiated Jejunal Enteroids""" "Ods014672","GSE182437","GSM5529243","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J6""_""format: Monolayer""_""substrate: Collagen""_""sample type: Differentiated Jejunal Enteroids""" "Ods014673","GSE182437","GSM5529244","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J11""_""format: Monolayer""_""substrate: Collagen""_""sample type: Differentiated Jejunal Enteroids""" "Ods014674","GSE182437","GSM5529245","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J2""_""format: Monolayer""_""substrate: Matrigel""_""sample type: Differentiated Jejunal Enteroids""" "Ods014675","GSE182437","GSM5529246","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J3""_""format: Monolayer""_""substrate: Matrigel""_""sample type: Differentiated Jejunal Enteroids""" "Ods014676","GSE182437","GSM5529247","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J4""_""format: Monolayer""_""substrate: Matrigel""_""sample type: Differentiated Jejunal Enteroids""" "Ods014677","GSE182437","GSM5529248","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J6""_""format: Monolayer""_""substrate: Matrigel""_""sample type: Differentiated Jejunal Enteroids""" "Ods014678","GSE182437","GSM5529249","Jejunum","RNA-Seq","Homo sapiens",NA,"""tissue: Intestine""_""segment: Jejunum""_""cell line: J11""_""format: Monolayer""_""substrate: Matrigel""_""sample type: Differentiated Jejunal Enteroids""" "Ods014753","GSE183903","GSM5573452","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain Organoids""_""structure: striatum""" "Ods014754","GSE183903","GSM5573453","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain Organoids""_""structure: striatum""" "Ods014755","GSE183903","GSM5573454","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain Organoids""_""structure: striatum""" "Ods014756","GSE183903","GSM5573455","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain Organoids""_""structure: striatum""" "Ods014757","GSE183903","GSM5573456","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain Organoids""_""structure: striatum""" "Ods014758","GSE183903","GSM5573457","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain Organoids""_""structure: striatum""" "Ods014759","GSE183903","GSM5573458","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain Organoids""_""structure: striatum""" "Ods014760","GSE183903","GSM5573459","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain Organoids""_""structure: striatum""" "Ods014761","GSE183903","GSM5573460","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain Organoids""_""structure: striatum""" "Ods014762","GSE183903","GSM5573461","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain Organoids""_""structure: striatum""" "Ods014763","GSE183903","GSM5573462","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain Organoids""_""structure: striatum""" "Ods014764","GSE183903","GSM5573463","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain Organoids""_""structure: striatum""" "Ods014765","GSE183903","GSM5573464","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain Organoids""_""structure: striatum""" "Ods014766","GSE183903","GSM5573465","Brain","RNA-Seq","Homo sapiens",NA,"""tissue: Brain Organoids""_""structure: striatum""" "Ods014826","GSE186444","GSM5651843","Liver","RNA-Seq","Homo sapiens","34392560","""age: 13 yr""_""diagnosis: Healthy Donor""_""differentiated: No""" "Ods014827","GSE186444","GSM5651845","Liver","RNA-Seq","Homo sapiens","34392560","""age: 17 yr""_""diagnosis: Healthy Donor""_""differentiated: No""" "Ods014886","GSE187006","GSM5665702","Forebrain","RNA-Seq","Homo sapiens",NA,"""tissue: forebrain organoids""_""tissue derived from: U1M iPS cell line""_""treatment: control""" "Ods014887","GSE187006","GSM5665703","Forebrain","RNA-Seq","Homo sapiens",NA,"""tissue: forebrain organoids""_""tissue derived from: U1M iPS cell line""_""treatment: control""" "Ods014888","GSE187006","GSM5665704","Forebrain","RNA-Seq","Homo sapiens",NA,"""tissue: forebrain organoids""_""tissue derived from: U1M iPS cell line""_""treatment: control""" "Ods014892","GSE187006","GSM5665708","Forebrain","RNA-Seq","Homo sapiens",NA,"""tissue: forebrain organoids""_""tissue derived from: U2F iPS cell line""_""treatment: control""" "Ods014893","GSE187006","GSM5665709","Forebrain","RNA-Seq","Homo sapiens",NA,"""tissue: forebrain organoids""_""tissue derived from: U2F iPS cell line""_""treatment: control""" "Ods014894","GSE187006","GSM5665710","Forebrain","RNA-Seq","Homo sapiens",NA,"""tissue: forebrain organoids""_""tissue derived from: U2F iPS cell line""_""treatment: control""" "Ods014924","GSE188211","GSM5672371","Heart","scRNA-Seq","Homo sapiens",NA,"""cell type: iPSC-derived cardiomyocytes, endothelial cells and fibroblasts""_""agent: Control""" "Ods014939","GSE188386","GSM5678476","Small intestine","RNA-Seq","Mus musculus",NA,"""cell type: intestinal epithelial cells""_""genotype: WT""_""time point: 24 h""" "Ods014940","GSE188386","GSM5678477","Small intestine","RNA-Seq","Mus musculus",NA,"""cell type: intestinal epithelial cells""_""genotype: WT""_""time point: 24 h""" "Ods014941","GSE188386","GSM5678478","Small intestine","RNA-Seq","Mus musculus",NA,"""cell type: intestinal epithelial cells""_""genotype: WT""_""time point: 24 h""" "Ods014945","GSE188386","GSM5678482","Small intestine","RNA-Seq","Mus musculus",NA,"""cell type: intestinal epithelial cells""_""genotype: WT""_""time point: 96 h""" "Ods014946","GSE188386","GSM5678483","Small intestine","RNA-Seq","Mus musculus",NA,"""cell type: intestinal epithelial cells""_""genotype: WT""_""time point: 96 h""" "Ods014947","GSE188386","GSM5678484","Small intestine","RNA-Seq","Mus musculus",NA,"""cell type: intestinal epithelial cells""_""genotype: WT""_""time point: 96 h""" "Ods014957","GSE188915","GSM5691833","Endometrium","RNA-Seq","Homo sapiens","34945786","""hormonal medication: None""_""disease state: Population Control""_""age: 29""_""menstrual stage: Menstrual""_""sampling method: Menstrual fluid""" "Ods015021","GSE189981","GSM5911491","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""protocol: Inhibitor-free""_""age: Day 17""_""cell type: Brain Organoid""" "Ods015025","GSE189981","GSM5911495","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 STIL -/-""_""protocol: Inhibitor-free""_""age: Day 17""_""cell type: Brain Organoid""" "Ods015029","GSE189981","GSM5911499","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 STIL +/-""_""protocol: Inhibitor-free""_""age: Day 17""_""cell type: Brain Organoid""" "Ods015033","GSE189981","GSM5911503","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""protocol: Inhibitor-free""_""age: Day 30""_""cell type: Brain Organoid""" "Ods015037","GSE189981","GSM5911507","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 STIL -/-""_""protocol: Inhibitor-free""_""age: Day 30""_""cell type: Brain Organoid""" "Ods015040","GSE189981","GSM5911510","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9 STIL +/-""_""protocol: Inhibitor-free""_""age: Day 30""_""cell type: Brain Organoid""" "Ods015043","GSE189981","GSM5911513","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""protocol: Inhibitor-free""_""age: Day 30""_""cell type: Brain Organoid""" "Ods015044","GSE189981","GSM5911514","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""protocol: Inhibitor-free""_""age: Day 30""_""cell type: Brain Organoid""" "Ods015045","GSE189981","GSM5911515","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""protocol: Inhibitor-free""_""age: Day 30""_""cell type: Brain Organoid""" "Ods015046","GSE189981","GSM5911516","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""protocol: Inhibitor-free""_""age: Day 30""_""cell type: Brain Organoid""" "Ods015056","GSE189981","GSM5911526","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""protocol: Inhibitor-free""_""age: Day 30""_""cell type: Brain Organoid""" "Ods015057","GSE189981","GSM5911527","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""protocol: Inhibitor-free""_""age: Day 30""_""cell type: Brain Organoid""" "Ods015058","GSE189981","GSM5911528","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""protocol: Inhibitor-free""_""age: Day 30""_""cell type: Brain Organoid""" "Ods015059","GSE189981","GSM5911529","Brain","RNA-Seq","Homo sapiens",NA,"""cell line: H9""_""protocol: Inhibitor-free""_""age: Day 30""_""cell type: Brain Organoid""" "Ods015113","GSE190633","GSM5726836","Spinal chord","scRNA-Seq","Homo sapiens","35265611","""cell type: iPSCs""_""tissue: iPSCs-derived brain organoids""_""age: organoids at 3 months old""" "Ods015120","GSE190899","GSM5733678","Ileum","RNA-Seq","Homo sapiens",NA,"""subject: 5""_""biopsy site: ileum""_""treatment: control""" "Ods015121","GSE190899","GSM5733680","Ileum","RNA-Seq","Homo sapiens",NA,"""subject: 5""_""biopsy site: ileum""_""treatment: control""" "Ods015122","GSE190899","GSM5733681","Ileum","RNA-Seq","Homo sapiens",NA,"""subject: 5""_""biopsy site: ileum""_""treatment: control""" "Ods015123","GSE190899","GSM5733683","Ileum","RNA-Seq","Homo sapiens",NA,"""subject: 5""_""biopsy site: ileum""_""treatment: control""" "Ods015124","GSE190899","GSM5733684","Ileum","RNA-Seq","Homo sapiens",NA,"""subject: 5""_""biopsy site: ileum""_""treatment: control""" "Ods015125","GSE190899","GSM5733686","Ileum","RNA-Seq","Homo sapiens",NA,"""subject: 5""_""biopsy site: ileum""_""treatment: control""" "Ods015134","GSE190899","GSM5733698","Sigmoid colon","RNA-Seq","Homo sapiens",NA,"""subject: 5""_""biopsy site: sigmoid colon""_""treatment: control""" "Ods015135","GSE190899","GSM5733699","Sigmoid colon","RNA-Seq","Homo sapiens",NA,"""subject: 5""_""biopsy site: sigmoid colon""_""treatment: control""" "Ods015136","GSE190899","GSM5733700","Sigmoid colon","RNA-Seq","Homo sapiens",NA,"""subject: 5""_""biopsy site: sigmoid colon""_""treatment: control""" "Ods015146","GSE190899","GSM5733710","Sigmoid colon","RNA-Seq","Homo sapiens",NA,"""subject: 7""_""biopsy site: sigmoid colon""_""treatment: control""" "Ods015147","GSE190899","GSM5733711","Sigmoid colon","RNA-Seq","Homo sapiens",NA,"""subject: 7""_""biopsy site: sigmoid colon""_""treatment: control""" "Ods015148","GSE190899","GSM5733712","Sigmoid colon","RNA-Seq","Homo sapiens",NA,"""subject: 7""_""biopsy site: sigmoid colon""_""treatment: control""" "Ods015149","GSE191169","GSM5740355","Tongue","scRNA-Seq","Mus musculus",NA,"""strain: C57BL/6""_""cell type: Adult mice tongue derived organoids""_""genotype: Wild type""_""treatment: Matrigel-embedded""" "Ods015189","GSE193759","GSM5820568","Brain","RNA-Seq","Homo sapiens",NA,"""cell type: iPSC derived cerebral organoid""_""line: WT 4.2""_""treatment: Uninfected""" "Ods015190","GSE193759","GSM5820569","Brain","RNA-Seq","Homo sapiens",NA,"""cell type: iPSC derived cerebral organoid""_""line: WT 4.2""_""treatment: Uninfected""" "Ods015191","GSE193759","GSM5820570","Brain","RNA-Seq","Homo sapiens",NA,"""cell type: iPSC derived cerebral organoid""_""line: WT 4.2""_""treatment: Uninfected""" "Ods015192","GSE193759","GSM5820571","Brain","RNA-Seq","Homo sapiens",NA,"""cell type: iPSC derived cerebral organoid""_""line: WT 21.8""_""treatment: Uninfected""" "Ods015204","GSE194184","GSM5830151","Small intestine","RNA-Seq","Mus musculus",NA,"""line: line26 wild type, Lgr5GFPDTR/+""_""tissue: small intestinal organoid""_""treatment: ENR medium""_""time point: Day 6""_""assay: RNA-seq""" "Ods015205","GSE194184","GSM5830152","Small intestine","RNA-Seq","Mus musculus",NA,"""line: line26 wild type, Lgr5GFPDTR/+""_""tissue: small intestinal organoid""_""treatment: ENR medium""_""time point: Day 6""_""assay: RNA-seq""" "Ods015206","GSE194184","GSM5830153","Small intestine","RNA-Seq","Mus musculus",NA,"""line: line26 wild type, Lgr5GFPDTR/+""_""tissue: small intestinal organoid""_""treatment: ENR medium""_""time point: Day 6""_""assay: RNA-seq""" "Ods015479","GSE67647","GSM1652656","Breast","RNA-Seq","Mus musculus","26701265","""strain: C57BL/6""_""genotype: MMTV-PyMT""_""tissue: Mammary tumor""_""treatment: Mock""" "Ods015480","GSE67647","GSM1652657","Breast","RNA-Seq","Mus musculus","26701265","""strain: C57BL/6""_""genotype: MMTV-PyMT""_""tissue: Mammary tumor""_""treatment: Mock""" "Ods015481","GSE67647","GSM1652658","Breast","RNA-Seq","Mus musculus","26701265","""strain: C57BL/6""_""genotype: MMTV-PyMT""_""tissue: Mammary tumor""_""treatment: Mock""" "Ods015482","GSE67647","GSM1652659","Breast","RNA-Seq","Mus musculus","26701265","""strain: C57BL/6""_""genotype: MMTV-PyMT""_""tissue: Mammary tumor""_""treatment: Mock""" "Ods015483","E-MTAB-4868","ERR1474893","Midbrain","RNA-Seq","Homo sapiens",NA,NA "Ods015485","E-MTAB-4868","ERR1474894","Midbrain","RNA-Seq","Homo sapiens",NA,NA "Ods015487","E-MTAB-4868","ERR1474895","Midbrain","RNA-Seq","Homo sapiens",NA,NA "Ods015489","E-MTAB-4868","ERR1474896","Midbrain","RNA-Seq","Homo sapiens",NA,NA "Ods015491","E-MTAB-4868","ERR1474897","Midbrain","RNA-Seq","Homo sapiens",NA,NA "Ods015493","E-MTAB-4868","ERR1474898","Midbrain","RNA-Seq","Homo sapiens",NA,NA "Ods015495","E-MTAB-5015","ERR1578721","Distal gut","RNA-Seq","Homo sapiens",NA,NA "Ods015497","E-MTAB-5015","ERR1578722","Distal gut","RNA-Seq","Homo sapiens",NA,NA "Ods015499","E-MTAB-5015","ERR1578723","Distal gut","RNA-Seq","Homo sapiens",NA,NA "Ods015501","E-MTAB-5015","ERR1578724","Distal gut","RNA-Seq","Homo sapiens",NA,NA "Ods015503","E-MTAB-5015","ERR1578725","Distal gut","RNA-Seq","Homo sapiens",NA,NA "Ods015505","E-MTAB-5015","ERR1578729","Proximal gut","RNA-Seq","Homo sapiens",NA,NA "Ods015507","E-MTAB-5015","ERR1578730","Proximal gut","RNA-Seq","Homo sapiens",NA,NA "Ods015509","E-MTAB-5015","ERR1578731","Proximal gut","RNA-Seq","Homo sapiens",NA,NA "Ods015511","E-MTAB-5015","ERR1578732","Proximal gut","RNA-Seq","Homo sapiens",NA,NA "Ods015513","E-MTAB-5015","ERR1578733","Proximal gut","RNA-Seq","Homo sapiens",NA,NA "Ods015515","E-MTAB-5015","ERR1578745","Sigmoid colon","RNA-Seq","Homo sapiens",NA,NA "Ods015517","E-MTAB-5015","ERR1578746","Sigmoid colon","RNA-Seq","Homo sapiens",NA,NA "Ods015519","E-MTAB-5015","ERR1578747","Sigmoid colon","RNA-Seq","Homo sapiens",NA,NA "Ods015521","E-MTAB-5015","ERR1578748","Sigmoid colon","RNA-Seq","Homo sapiens",NA,NA "Ods015523","E-MTAB-5015","ERR1578751","Sigmoid colon","RNA-Seq","Homo sapiens",NA,NA "Ods015525","E-MTAB-5015","ERR1578761","Terminal ileum","RNA-Seq","Homo sapiens",NA,NA "Ods015527","E-MTAB-5015","ERR1578762","Terminal ileum","RNA-Seq","Homo sapiens",NA,NA "Ods015529","E-MTAB-5015","ERR1578763","Terminal ileum","RNA-Seq","Homo sapiens",NA,NA "Ods015531","E-MTAB-5015","ERR1578764","Terminal ileum","RNA-Seq","Homo sapiens",NA,NA "Ods015533","E-MTAB-5015","ERR1578767","Terminal ileum","RNA-Seq","Homo sapiens",NA,NA "Ods015578","E-MTAB-6490","ERR2303762","Retina","RNA-Seq","Homo sapiens",NA,NA "Ods015580","E-MTAB-6490","ERR2303763","Retina","RNA-Seq","Homo sapiens",NA,NA "Ods015582","E-MTAB-6490","ERR2303764","Retina","RNA-Seq","Homo sapiens",NA,NA "Ods015584","E-MTAB-6490","ERR2303765","Retina","RNA-Seq","Homo sapiens",NA,NA "Ods015586","E-MTAB-6490","ERR2303766","Retina","RNA-Seq","Homo sapiens",NA,NA "Ods015588","E-MTAB-6490","ERR2303767","Retina","RNA-Seq","Homo sapiens",NA,NA "Ods015713","E-MTAB-9181","ERR4192579","Small intestine","RNA-Seq","Mus musculus",NA,NA "Ods015715","E-MTAB-9181","ERR4192580","Small intestine","RNA-Seq","Mus musculus",NA,NA "Ods015717","E-MTAB-9181","ERR4192581","Small intestine","RNA-Seq","Mus musculus",NA,NA "Ods015848","E-MTAB-10331","ERR5684104","Retina","RNA-Seq","Homo sapiens",NA,NA "Ods015850","E-MTAB-10331","ERR5684105","Retina","RNA-Seq","Homo sapiens",NA,NA "Ods015852","E-MTAB-10331","ERR5684106","Retina","RNA-Seq","Homo sapiens",NA,NA "Ods015854","E-MTAB-10331","ERR5684107","Retina","RNA-Seq","Homo sapiens",NA,NA "Ods015856","E-MTAB-10331","ERR5684108","Retina","RNA-Seq","Homo sapiens",NA,NA "Ods015858","E-MTAB-10331","ERR5684109","Retina","RNA-Seq","Homo sapiens",NA,NA "Ods015860","E-MTAB-10331","ERR5684110","Retina","RNA-Seq","Homo sapiens",NA,NA "Ods015862","E-MTAB-10331","ERR5684111","Retina","RNA-Seq","Homo sapiens",NA,NA "Ods015864","E-MTAB-11026","ERR7056415","Colon","RNA-Seq","Homo sapiens",NA,NA "Ods015866","E-MTAB-11026","ERR7056416","Colon","RNA-Seq","Homo sapiens",NA,NA "Ods015868","E-MTAB-11026","ERR7056417","Colon","RNA-Seq","Homo sapiens",NA,NA "Ods015870","E-MTAB-11026","ERR7056418","Colon","RNA-Seq","Homo sapiens",NA,NA "Ods015872","E-MTAB-11026","ERR7056419","Colon","RNA-Seq","Homo sapiens",NA,NA "Ods015874","E-MTAB-11026","ERR7056420","Colon","RNA-Seq","Homo sapiens",NA,NA "Ods015876","E-MTAB-11557","ERR9353870","Colon","RNA-Seq","Homo sapiens",NA,NA "Ods015878","E-MTAB-11557","ERR9353871","Colon","RNA-Seq","Homo sapiens",NA,NA "Ods015892","E-MTAB-11557","ERR9353878","Colon","RNA-Seq","Homo sapiens",NA,NA "Ods015894","E-MTAB-11557","ERR9353879","Colon","RNA-Seq","Homo sapiens",NA,NA "Ods015896","E-MTAB-11557","ERR9353880","Colon","RNA-Seq","Homo sapiens",NA,NA "Ods015898","E-MTAB-11557","ERR9353881","Colon","RNA-Seq","Homo sapiens",NA,NA "Ods015900","E-MTAB-11557","ERR9353882","Colon","RNA-Seq","Homo sapiens",NA,NA "Ods015902","E-MTAB-11557","ERR9353883","Colon","RNA-Seq","Homo sapiens",NA,NA "Ods015904","E-MTAB-11557","ERR9353884","Ileum","RNA-Seq","Homo sapiens",NA,NA "Ods015906","E-MTAB-11557","ERR9353885","Ileum","RNA-Seq","Homo sapiens",NA,NA