NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 3,275.3 |
| Mean read quality | 11.9 |
| Median read length | 1,155.0 |
| Median read quality | 13.7 |
| Number of reads | 1,370,242.0 |
| Read length N50 | 8,566.0 |
| STDEV read length | 4,414.6 |
| Total bases | 4,487,929,618.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1370213 (100.0%) 4487.9Mb |
| >Q7 | 1367763 (99.8%) 4483.4Mb |
| >Q10 | 1185126 (86.5%) 3740.2Mb |
| >Q12 | 982295 (71.7%) 3199.4Mb |
| >Q15 | 378065 (27.6%) 1254.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 24.2 (187) |
| 2 | 23.7 (345) |
| 3 | 23.6 (325) |
| 4 | 23.6 (545) |
| 5 | 23.5 (434) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 58102 (9.1) |
| 2 | 55216 (8.6) |
| 3 | 54605 (7.9) |
| 4 | 53944 (8.8) |
| 5 | 53433 (9.1) |