NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 3,659.3 |
| Mean read quality | 11.4 |
| Median read length | 1,542.0 |
| Median read quality | 12.7 |
| Number of reads | 2,438,059.0 |
| Read length N50 | 8,532.0 |
| STDEV read length | 4,608.9 |
| Total bases | 8,921,609,904.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 2438052 (100.0%) 8921.6Mb |
| >Q7 | 2436064 (99.9%) 8919.7Mb |
| >Q10 | 2020926 (82.9%) 7648.7Mb |
| >Q12 | 1474235 (60.5%) 5782.8Mb |
| >Q15 | 376963 (15.5%) 1327.1Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 28.4 (136) |
| 2 | 27.6 (10) |
| 3 | 27.3 (253) |
| 4 | 27.1 (228) |
| 5 | 26.6 (131) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 83128 (8.9) |
| 2 | 69515 (13.4) |
| 3 | 69168 (12.3) |
| 4 | 69015 (8.2) |
| 5 | 68178 (10.7) |