NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 3,176.8 |
| Mean read quality | 9.7 |
| Median read length | 740.0 |
| Median read quality | 10.6 |
| Number of reads | 2,545,093.0 |
| Read length N50 | 11,128.0 |
| STDEV read length | 5,362.3 |
| Total bases | 8,085,329,304.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 2545093 (100.0%) 8085.3Mb |
| >Q7 | 2538353 (99.7%) 8083.4Mb |
| >Q10 | 1575502 (61.9%) 5476.3Mb |
| >Q12 | 503277 (19.8%) 1339.5Mb |
| >Q15 | 13707 (0.5%) 3.9Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 23.0 (168) |
| 2 | 22.5 (101) |
| 3 | 22.1 (100) |
| 4 | 21.6 (131) |
| 5 | 21.4 (182) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 88078 (11.5) |
| 2 | 82716 (8.8) |
| 3 | 82002 (8.6) |
| 4 | 78660 (9.0) |
| 5 | 75737 (9.9) |