NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 1,793.9 |
| Mean read quality | 9.6 |
| Median read length | 621.0 |
| Median read quality | 10.4 |
| Number of reads | 3,747,458.0 |
| Read length N50 | 6,349.0 |
| STDEV read length | 3,452.2 |
| Total bases | 6,722,429,379.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 3747458 (100.0%) 6722.4Mb |
| >Q7 | 3735678 (99.7%) 6718.7Mb |
| >Q10 | 2097851 (56.0%) 4549.5Mb |
| >Q12 | 857303 (22.9%) 1850.3Mb |
| >Q15 | 30188 (0.8%) 12.8Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 26.9 (107) |
| 2 | 24.4 (116) |
| 3 | 23.4 (109) |
| 4 | 23.0 (181) |
| 5 | 22.7 (135) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 75900 (9.1) |
| 2 | 69180 (12.4) |
| 3 | 69094 (7.2) |
| 4 | 68252 (13.0) |
| 5 | 67723 (8.4) |