NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 3,239.5 |
| Mean read quality | 11.2 |
| Median read length | 1,120.0 |
| Median read quality | 12.3 |
| Number of reads | 3,522,218.0 |
| Read length N50 | 8,492.0 |
| STDEV read length | 4,485.9 |
| Total bases | 11,410,368,740.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 3522200 (100.0%) 11410.4Mb |
| >Q7 | 3515480 (99.8%) 11404.4Mb |
| >Q10 | 2919332 (82.9%) 9597.6Mb |
| >Q12 | 1968761 (55.9%) 6533.1Mb |
| >Q15 | 290850 (8.3%) 521.6Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 29.0 (122) |
| 2 | 27.8 (116) |
| 3 | 27.6 (196) |
| 4 | 27.3 (141) |
| 5 | 27.2 (209) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 76057 (11.1) |
| 2 | 66502 (7.9) |
| 3 | 62484 (13.0) |
| 4 | 58608 (13.9) |
| 5 | 57391 (7.7) |