NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 2,673.7 |
| Mean read quality | 11.3 |
| Median read length | 1,104.0 |
| Median read quality | 12.5 |
| Number of reads | 2,365,051.0 |
| Read length N50 | 6,396.0 |
| STDEV read length | 3,814.4 |
| Total bases | 6,323,493,577.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 2365040 (100.0%) 6323.5Mb |
| >Q7 | 2360661 (99.8%) 6318.3Mb |
| >Q10 | 2007850 (84.9%) 5382.0Mb |
| >Q12 | 1385087 (58.6%) 3777.0Mb |
| >Q15 | 226609 (9.6%) 433.1Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 28.4 (140) |
| 2 | 26.8 (283) |
| 3 | 25.9 (287) |
| 4 | 25.7 (223) |
| 5 | 25.6 (91) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 67557 (8.4) |
| 2 | 61842 (7.3) |
| 3 | 61725 (10.2) |
| 4 | 60823 (7.8) |
| 5 | 59861 (9.0) |