NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 1,587.1 |
| Mean read quality | 9.8 |
| Median read length | 511.0 |
| Median read quality | 10.7 |
| Number of reads | 2,251,794.0 |
| Read length N50 | 5,183.0 |
| STDEV read length | 2,902.6 |
| Total bases | 3,573,757,456.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 2251794 (100.0%) 3573.8Mb |
| >Q7 | 2245314 (99.7%) 3572.1Mb |
| >Q10 | 1446981 (64.3%) 2489.5Mb |
| >Q12 | 514739 (22.9%) 829.0Mb |
| >Q15 | 15532 (0.7%) 4.5Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 24.2 (154) |
| 2 | 24.1 (187) |
| 3 | 23.6 (210) |
| 4 | 23.1 (97) |
| 5 | 23.0 (135) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 93464 (7.8) |
| 2 | 63274 (8.8) |
| 3 | 61384 (10.0) |
| 4 | 54724 (9.3) |
| 5 | 53801 (8.7) |