NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 2,865.0 |
| Mean read quality | 9.1 |
| Median read length | 574.0 |
| Median read quality | 9.9 |
| Number of reads | 2,253,943.0 |
| Read length N50 | 12,271.0 |
| STDEV read length | 5,431.2 |
| Total bases | 6,457,515,967.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 2253943 (100.0%) 6457.5Mb |
| >Q7 | 2246529 (99.7%) 6455.3Mb |
| >Q10 | 1059486 (47.0%) 3404.2Mb |
| >Q12 | 172364 (7.6%) 295.3Mb |
| >Q15 | 2607 (0.1%) 0.6Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 22.1 (180) |
| 2 | 22.0 (252) |
| 3 | 21.0 (166) |
| 4 | 20.5 (141) |
| 5 | 19.8 (162) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 84416 (8.5) |
| 2 | 83827 (8.6) |
| 3 | 77425 (8.3) |
| 4 | 71734 (8.3) |
| 5 | 71389 (8.0) |