QUAST

{"date":"25 July 2025, Friday, 04:56:07","assembliesNames":["genome.nextpolish"],"referenceName":"","order":[0],"report":[["Alignment-based statistics",[]],["Reads mapping",[]],["Misassemblies",[]],["Unaligned",[]],["Per base quality",[{"metricName":"# N's per 100 kbp","quality":"Less is better","values":["0.00"],"isMain":true},{"metricName":"# N's","quality":"Less is better","values":[0],"isMain":false}]],["Statistics without reference",[{"metricName":"# contigs","quality":"Equal","values":[2516],"isMain":true},{"metricName":"# contigs (>= 0 bp)","quality":"Equal","values":[2517],"isMain":false},{"metricName":"# contigs (>= 1000 bp)","quality":"Equal","values":[2478],"isMain":false},{"metricName":"# contigs (>= 5000 bp)","quality":"Equal","values":[2224],"isMain":false},{"metricName":"# contigs (>= 10000 bp)","quality":"Equal","values":[1916],"isMain":false},{"metricName":"# contigs (>= 25000 bp)","quality":"Equal","values":[1282],"isMain":false},{"metricName":"# contigs (>= 50000 bp)","quality":"Equal","values":[723],"isMain":false},{"metricName":"Largest contig","quality":"More is better","values":[3424770],"isMain":true},{"metricName":"Total length","quality":"More is better","values":[163621180],"isMain":true},{"metricName":"Total length (>= 0 bp)","quality":"More is better","values":[163621664],"isMain":false},{"metricName":"Total length (>= 1000 bp)","quality":"More is better","values":[163594640],"isMain":true},{"metricName":"Total length (>= 5000 bp)","quality":"More is better","values":[162806500],"isMain":false},{"metricName":"Total length (>= 10000 bp)","quality":"More is better","values":[160490223],"isMain":true},{"metricName":"Total length (>= 25000 bp)","quality":"More is better","values":[150003174],"isMain":false},{"metricName":"Total length (>= 50000 bp)","quality":"More is better","values":[130145019],"isMain":true},{"metricName":"N50","quality":"More is better","values":[190374],"isMain":false},{"metricName":"N90","quality":"More is better","values":[28089],"isMain":false},{"metricName":"auN","quality":"More is better","values":["470341.1"],"isMain":false},{"metricName":"L50","quality":"Less is better","values":[181],"isMain":false},{"metricName":"L90","quality":"Less is better","values":[1178],"isMain":false},{"metricName":"GC (%)","quality":"Equal","values":["48.74"],"isMain":false}]],["K-mer-based statistics",[]],["BUSCO completeness",[{"metricName":"Complete BUSCO (%)","quality":"More is better","values":["0.00"],"isMain":true},{"metricName":"Partial BUSCO (%)","quality":"Less is better","values":["0.00"],"isMain":true}]],["Predicted genes",[{"metricName":"# predicted rRNA genes","quality":"More is better","values":["419 + 6 part"],"isMain":true}]],["Similarity statistics",[]],["Reference statistics",[]]],"subreferences":[],"subreports":[],"minContig":500}

{{ qualities }}

{{ mainMetrics }}

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{{ coordmisassemblies }}

{{ featuresInContigs }}

{{ operonsInContigs }}

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{{ allMisassemblies }}

{{ krona }}

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{"links":["icarus_viewers/contig_size_viewer.html"],"links_names":["View in Icarus contig browser"]}