NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 3,885.5 |
| Mean read quality | 10.4 |
| Median read length | 1,123.0 |
| Median read quality | 11.6 |
| Number of reads | 1,281,452.0 |
| Read length N50 | 12,296.0 |
| STDEV read length | 6,058.4 |
| Total bases | 4,979,114,364.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1281450 (100.0%) 4979.1Mb |
| >Q7 | 1274436 (99.5%) 4974.1Mb |
| >Q10 | 921662 (71.9%) 3681.4Mb |
| >Q12 | 557935 (43.5%) 2280.1Mb |
| >Q15 | 35698 (2.8%) 46.1Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 26.1 (100) |
| 2 | 23.2 (151) |
| 3 | 22.5 (114) |
| 4 | 22.1 (119) |
| 5 | 21.6 (195) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 85249 (9.5) |
| 2 | 84631 (9.2) |
| 3 | 83928 (9.2) |
| 4 | 82101 (8.5) |
| 5 | 77771 (9.1) |